Skermanella rosea: JL101_007345
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Entry
JL101_007345 CDS
T07666
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_007345 (radA)
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JL101_007345 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
NTPase_1
AAA_22
ADK_lid
nSTAND3
DUF7129
SLFN-g3_helicase
AAA
RecA
DUF7125
AAA_24
NACHT
MCM
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UEM05243
LinkDB
All DBs
Position
complement(1582918..1584327)
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AA seq
469 aa
AA seq
DB search
MARSNTRYVCQSCGASSPKWSGKCDSCGEWNTLVEEAVPESAPKGLGRTAGTGRRIDFVD
LKGVSEKAPRRITGIAEYDRVCGGGMVPGSALLVGGDPGIGKSTLLLQVVCSLARNLRCA
YISGEEAVDQVRMRASRLGTSESAVELAAATNVRDIVASLDAADAPGLCIIDSIQTMYVD
TLDSAPGTVAQVRASAQELIRVAKRRGIILVLVGHVTKEGTIAGPRVLEHMVDTVLYFEG
ERGHQFRILRAVKNRFGPTDEIGVFEMTDSGLTEVSNPSELFLAERRGDVSGACVFAGLE
GTRPVLVEIQALVAPSPLGTPRRAVVGWDSGRLAMVLAVLEARCGVAIGANDVYLNVAGG
LRIGEPAADLAVAAALVSSLTGEPVPADTVVFGEIGLSGEIRAVSQTDVRLKEAAKLGFE
KSLMPTQRSRKSGGRSDAGIRRIELAHLEDLIPMFQEPRAAASAGRART
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgttccaacacacgttacgtctgccagtcctgcggcgccagctctccgaaatgg
agcggcaagtgcgactcatgcggcgagtggaacaccctggtggaagaggcggtcccggaa
agcgcccccaaggggctgggccgcacggccggcacggggcggcggatcgatttcgtcgat
ctcaagggtgtttccgagaaggccccccggcgcatcaccggcatcgcggagtatgaccgc
gtctgcggcggcggcatggtgccggggtctgccctgctggtcggcggcgatcccgggatc
ggcaaatccacccttctgctccaggtcgtgtgcagcctcgcccggaacctccgctgcgcc
tacatctcgggcgaggaggcggtcgatcaggtcaggatgcgcgcctctcgcctcggcacc
agcgagtccgcggtcgagctcgccgcggcgaccaacgtccgcgacatcgttgcctccctc
gacgccgccgacgcgccgggcctgtgcatcatcgactcgatccagaccatgtacgtcgac
acgctggacagcgcaccgggcacggtcgcccaggtgcgcgcctcggcccaggaactgatc
cgggtcgccaagcggcgcggcatcatcctggtcctggtcgggcatgtcaccaaggaaggc
acgatcgcgggtccgcgggtgctcgagcacatggtcgataccgtgctctatttcgaaggg
gagcgcggccaccagttccgtatcctgcgcgccgtcaagaaccgcttcggcccgaccgac
gagatcggcgtgttcgagatgaccgactccggcctgaccgaagtgtcgaacccgtccgag
ctgttcctggcggaacggcggggcgacgtgtccggcgcctgcgtcttcgccgggctggaa
ggaacccgtcccgtgctggtcgagattcaggccctggtcgccccctccccgctcggcacg
ccgcgccgcgcggtggtcggctgggacagcggcaggctcgccatggtgctcgccgtgctg
gaggcgcgctgcggcgtcgcgatcggcgccaacgacgtctacctgaacgtggccggcggc
ctgcggatcggcgagcccgccgccgacctggcggtcgccgcggcgctggtgtcgtcgctg
accggagagccggtgccggcagacacggtggtgttcggcgagatcgggctatcgggcgag
atccgagcggtcagccagactgacgtccgcctgaaggaggccgcgaagctcggtttcgag
aagtccctgatgccaacgcagcgcagccggaaatcgggcggccggagcgatgccggcatc
cgcaggatcgaactggcccacctggaggacctgatccccatgttccaggaaccccgcgcc
gcagcgtccgccgggcgggcgcgcacctga
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