Skermanella rosea: JL101_007560
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Entry
JL101_007560 CDS
T07666
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sroe
Skermanella rosea
Pathway
sroe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JL101_007560 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sroe01007
]
JL101_007560 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sroe03016
]
JL101_007560 (aspS)
03029 Mitochondrial biogenesis [BR:
sroe03029
]
JL101_007560 (aspS)
Enzymes [BR:
sroe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JL101_007560 (aspS)
Amino acid related enzymes [BR:
sroe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JL101_007560 (aspS)
Transfer RNA biogenesis [BR:
sroe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JL101_007560 (aspS)
Prokaryotic type
Other AARSs
JL101_007560 (aspS)
Mitochondrial biogenesis [BR:
sroe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JL101_007560 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UEM05284
LinkDB
All DBs
Position
1626968..1628818
Genome browser
AA seq
616 aa
AA seq
DB search
MHPYRTHTCGALRDTDAGQIVRLSGWINRKRDHGQLLFIDLRDHYGMTQCVIDSSSPLFQ
VAEGLRLESVVTVTGKVVGRTPETINDKLPTGRIEVQIQELAVQSAADPLPLQVNSDADA
GEEIRLRYRFLDLRREKMQQNILLRSQVIASVRRRMIEQGFNEFQTPILTASSPEGARDF
LVPSRMHPGKFYALPQAPQQFKQLLMMAGYDRYFQIAPCFRDEDSRADRSPGEFYQLDFE
MSFVTQEDVFAAIEPVLYGIFDEFGGFRRPAKPELTPYPFPRIPYAESMLKYGNDKPDLR
NPLVITDVTAVFQRDDVEFKAFKSVIAKGGVVRAIRAPNVGDRPRSFFDKLNDWARGLGA
PGLGYILFESGGGKGPIAKFVPEAAQAALRETVGLSDGDAVFFVCDQPGPAAKLAGFART
RIAEELGIVEKNAFRFCWIVDFPMYERDEETGKIDFSHNPFSMPQGGLEALENQDPLTIN
AYQYDIVCNGIELSSGAIRNHLPEVMYKAFAIAGYPPEELEARFGGMLSAMKLGAPPHGG
SAPGIDRIVMLLADEPNIREVIVFPLNQRAEDLLMQAPAPVPAERLKELSIKLDLPKPKT
VAAPPTAEGTVSPKGA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctaccggacccacacctgcggtgccctgcgcgataccgatgccggccagatc
gtgcgcctgtcgggctggatcaatcgtaagcgcgaccacggacaactgctgttcatcgac
ctgcgcgaccactacggcatgacgcagtgcgtgatcgacagctccagcccgctgttccag
gtggccgaggggctgcgcctggagtcggtcgtcacggtcaccggcaaggttgtcggccgc
acgcccgagacgataaacgacaagctgccgaccggccggatcgaggtgcagatccaggag
ctggcggtgcagagcgccgccgatccgctgccgctccaggtcaacagcgacgccgacgcc
ggcgaggagatccgcctgcgctaccgcttcctggaccttcggcgcgagaagatgcagcag
aacatcctgctgcgctcccaggtcatcgcgtcggtccgccgccgcatgatcgagcagggc
ttcaacgagttccagacgccgatcctgacggccagcagcccggaaggggcgcgggacttc
ctggtgccgagccgcatgcatcccggcaagttctacgcgctgccgcaggcgccgcagcag
ttcaagcagctgctgatgatggccggctacgaccgctatttccagatcgctccctgcttc
cgcgacgaggacagccgcgccgaccgcagcccgggcgagttctaccagctcgacttcgag
atgtccttcgtcacccaggaggacgtcttcgccgcgatcgagcccgtgctgtacggcatc
ttcgacgagttcggcggcttccgccgtccggccaagccggagctgaccccgtacccgttc
ccgcgcatcccctatgccgagtcgatgctgaagtacggcaacgacaagccggacctgcgc
aacccgctggtcatcaccgacgtgacggcggtgttccagcgcgacgacgtcgagttcaag
gcgttcaagtcggtcatcgccaagggcggcgtggtccgcgcgatccgcgctcccaacgtc
ggcgaccggccgcgcagcttcttcgacaagctgaacgactgggcgcgcggcctgggtgct
cccggcctcggctacatcctgttcgagtccggtggcggcaaggggccgatcgccaagttc
gtgccggaagcggcccaggcggccctgcgcgagacggtcggcctgagcgacggcgacgcc
gtgttcttcgtgtgcgaccagcccggtcccgccgccaagctggccggcttcgcccggacc
aggatcgccgaggaactgggcatcgtcgagaagaacgccttccggttctgctggatcgtc
gatttcccgatgtacgagcgggacgaggagaccggcaagatcgacttcagccacaacccg
ttctcgatgccccagggcggcctggaagccctcgagaaccaggaccctctgacgatcaac
gcctaccagtacgatatcgtctgcaacggaatcgagctgtcgtcgggcgccatccggaac
catctgccggaggtcatgtacaaggccttcgcgatcgccggctacccgccggaggagctg
gaagcccggttcggcggcatgctgtcggcgatgaagctgggcgccccgccgcacggcggc
tcggctcccggcatcgaccgcatcgtcatgctgcttgccgacgagccgaacatccgcgaa
gtcatcgtcttcccgctgaaccagcgcgccgaggacttgctgatgcaggcaccggctccg
gtcccggcggagcggttgaaggagctgtcgatcaagctcgacttgcccaagccaaagacg
gtcgccgccccgcccacggcggaagggaccgtttcacccaagggtgcgtaa
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