Skermanella rosea: JL101_007860
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Entry
JL101_007860 CDS
T07666
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_007860 (addB)
Enzymes [BR:
sroe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL101_007860 (addB)
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JL101_007860 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
GvpK
Motif
Other DBs
NCBI-ProteinID:
UEM05340
LinkDB
All DBs
Position
complement(1701696..1704683)
Genome browser
AA seq
995 aa
AA seq
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MAQVFNIPSGVPFVDALATGILARVEADGGPLALAGHTVLLPTRRACRTLREAFLRLSGG
APQLLPRMSPLGDIDADELSLAIEEIPGLAGALDLPPALTSLRRQLLLAQAILRKDGKSI
TADQAARLAADLARLLDQVQTEGVPFDRLEGLVPEEYAQHWQVTLEFLKILTHVWPTILE
LEGAIDAAERRNLVLKAQAEAWRANPPAGPVIAAGSTGTIPATAELLAVVATMPNGCVVL
PGLDTDMDETSWDAAASDDGHPQHGMASLLRKLDLPRDRVEPWDCPLTPGNPARTRLLSE
AMRPAATTEAWRGLDGIDEGALDGITRIDCPTSQEEAAVIALMMRQTLEVPDRTAALVTP
DRNLARRVATALERWNIAVDDSGGRPLADTAVGTYLRLTAACAVERADPLPLLAVLKHPL
AGGGLNPLWFRTQARDLERAVLRGPRPAPGFRGLLAALDEAENNRFDRGGDTRRELVQYV
EHLHAMAAPFFDAMEAPDPQPPAEWLTLHVAFAERLAASDDLSGPDRLWRHEDGEAAAGF
VNELRQAAGDFPPIAASQYPAFLEALMAAHVVRPRYGRHPRLSILGLLEARLQHADVMIL
GGLNEGTWPPDAASDPWLSRPMRKAFGLPVPERLVGVAAHDFVQAAGGARVVLSRAERVD
GTPTVPSRWLLRLDTVLRGLDLNGIIEMETEQWLSWVDQLDRPDAVRPLPAPEPRPPLSA
RPRSLSVTEIETWMRDPYAIYARRILKLEALEPIAADPGASERGQFIHQALDAFTKTYPS
ALPGAAVEKLTELGRDAFGKLLSQPEVWAFWWPRFERVAAWFIQFETERRRTVRPLATEI
KGKLELEGPAGPFTLRAKADRIDKLPDGGLAIIDYKTGTPPSNLEVALGFAPQLPLEAVM
AAAGGFETVDAAPVGDLAFWKLSGGDPAGAEIPVKGDLALLAEQARAGLIDLIRTFDDPA
TPYRSRPRPDWAPRYTDYGHLARVQEWSAGGEPVE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagtcttcaacatcccctcgggcgtaccgttcgtcgatgccctggcgaccggc
atcctcgcccgcgtggaggcggacggcggtccgctggcccttgccggccataccgtcctg
ctgccgacccggcgcgcctgccggaccctgcgcgaagccttcctccgcctctccggcggc
gctccccagctcctgccgcgcatgagcccgctcggcgacatcgacgccgacgagctcagc
ctcgcgatcgaggagatccccggcctcgccggcgcgctcgacctgcctcccgccctgacc
agcctgcgccgccagctcctcctggcccaggccatcctcaggaaggacggcaagtccatc
accgccgaccaagccgcccggctggcggccgacctcgcccgcctgctcgaccaggtgcag
accgagggcgtgccgttcgaccggctcgaagggctggtgccggaggaatacgcccagcac
tggcaggtcacgctggaattcctgaagatcctgacccatgtctggccgaccatcctggag
ctggaaggcgccatcgacgccgccgagcggcgcaacctcgtcctcaaggcccaggccgag
gcgtggcgggccaacccgccggccggcccggtgatcgccgccggctcgaccggcaccatc
ccggcgaccgccgaactcctggccgtcgtcgcgaccatgcccaacggctgcgtcgtcctt
cccggcctcgacaccgacatggacgagacgagctgggacgcggcggcgtccgacgacggc
cacccccagcacggcatggccagcctgctgcgcaagctcgacctgccgcgcgaccgggtc
gagccttgggactgcccgctgacccccggcaacccggcgcgcacccgcctgctcagcgag
gcgatgcggcccgcggcgacgaccgaggcctggcgggggctagacggcatcgacgaaggc
gcgctcgacggcataacccggatcgactgcccgacctcccaggaggaggccgccgtcatc
gccctgatgatgcgccagacgctggaagtccccgaccgcaccgccgccctggtgacgccc
gaccgcaacctcgcccgccgggtcgccaccgcgctggagcgctggaacatcgcggtggac
gattccggcggccggccgctggccgacaccgccgtcggcacctacctgcgcctgaccgcc
gcctgcgcggtcgaacgggccgacccgctgccgctcctggccgtgctcaagcacccgctg
gcgggcggcgggctcaacccgctgtggttccgcacccaggcccgcgacctggaacgcgcc
gtcctgcgcggcccccgcccggcgcccggcttccgcggccttctcgccgccctggacgag
gccgagaacaaccgcttcgaccgcggcggcgacacgaggcgcgagctggtccagtatgtc
gagcacctgcacgccatggccgcccccttcttcgacgccatggaagcgcccgacccgcag
cccccggccgagtggctgaccctgcacgtcgcctttgccgaacggctggccgccagcgat
gacctgtccggccccgaccggctgtggcgccacgaggacggcgaggcggcggccggtttc
gtgaacgagctgcgccaggcggccggcgacttcccgccgatcgcggcgtcccagtacccg
gccttcctggaagccctgatggcggcccacgtggtccgcccgcgctacggccggcacccg
cgcctcagcatcctgggactgctcgaagcccggttgcagcatgccgacgtgatgatcctc
ggcggcctcaacgagggcacttggccgcccgatgccgcctccgacccctggctgtcgcgg
ccgatgcgcaaggccttcgggctgcccgtgcccgagcggctggtcggcgtcgccgcccat
gatttcgtccaggccgcaggcggcgcccgggtggtcctgtcccgcgccgagcgggtggac
ggcacgccgaccgtgccgtcccgctggctgctgcgactcgacaccgtgctgcgcggcctg
gacctgaacggcatcatcgagatggagacggagcagtggctgtcctgggtcgaccagctc
gaccggcccgacgccgtccgcccgctcccggcgcccgagccgcgcccgccgctctccgcc
cgcccgcgcagcctgtcggtcaccgagatcgagacctggatgcgcgatccctacgcgatc
tacgcccgccggatcctgaagctggaggcgctggagccgatcgccgccgatccgggagct
tccgagcgcggccagttcatccaccaggcgctggacgccttcaccaagacctatcccagc
gccctgcccggcgcggcggtcgagaaactgaccgagctgggccgcgacgccttcggcaag
ctgctgagccagcccgaggtctgggccttctggtggccccgcttcgagcgggtcgccgcc
tggttcatccagttcgagacggagcgccgccgcacggtccgccccctggcgaccgaaatc
aagggcaagctggagctggaaggccccgccggccccttcacgctgcgcgccaaggccgac
cgcatcgacaagctgcccgacggcggcctcgccatcatcgactacaagaccggcacgccc
ccgtcgaacctggaggtcgccctgggtttcgcgccccagttgccgctggaagccgtcatg
gcggctgccggcgggttcgagacggtggacgcagctccggtgggcgacctcgccttctgg
aagctgtcgggcggcgacccggccggcgccgagatccccgtcaagggcgacctcgccctg
ctggccgagcaggcccgcgccggcctgatcgacctgatccgcaccttcgacgatccggcg
accccctaccgctcgcgcccccgcccggactgggcgccccgctacaccgactacggccat
ctggcccgcgtccaggaatggtccgccggcggcgagcccgtggagtga
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