Skermanella rosea: JL101_009800
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Entry
JL101_009800 CDS
T07666
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_009800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_009800
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JL101_009800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
AAA_28
AAA
SMC_N
TOBE
AAA_22
AAA_16
ORC-CDC6-like
AAA_19
Rad17
Motif
Other DBs
NCBI-ProteinID:
UEM05706
LinkDB
All DBs
Position
complement(2140884..2141891)
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AA seq
335 aa
AA seq
DB search
MAGPADIELAAVTKMYGPVTAVDSIDLRIPAGTYCCLLGPSGCGKTSTLRMIAGHESVSD
GDILLGDTHINDLPPARRGTAMMFQSYALFPHLTCVDNVAFSLKLKGVSKPERRAKAMDL
LGLVQMDKYAERLPAQLSGGQQQRVALARALITNPSALLLDEPLSALDPFLRVKMREELK
RLQRELGISFIHVTHGQEEALALADLVVVMNNGRIAQAGSPREVFNRPRDAFVARFIGGH
NVLSSLDGAAGRQFAVRTDKIRILPDRAAAGPNSFTGTVRLVEYQGPMVHLRLASPGVEE
FAVTVTEQAFFAAPLNAGERVTAVWAEEDMHPLAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccggaccggcggatatcgaactcgctgcggtcaccaagatgtacgggccggtaacg
gcggtcgattcgatcgacctgcgcattccggcgggaacatattgctgccttctgggaccc
agcggctgtggcaagacttcgacgctccggatgatcgcgggacatgagtccgtctccgac
ggcgacatactgcttggcgatacgcacatcaacgacctgccgcccgcccggcgcggcacg
gcgatgatgttccagagctacgcgctgttcccgcacctcacctgcgtcgacaacgtcgcc
ttcagcctgaagctgaagggggtttcgaagcccgagcgccgggccaaggccatggacctg
ctcggcctcgtccagatggacaagtacgccgagcgcctgcccgcccagctttccggcggg
cagcagcagcgggtcgccctcgcccgcgcgctgatcaccaacccgagcgcgctgctgctg
gacgagccgctgtcggcgctcgaccccttcctgcgggtcaagatgcgggaggagttgaag
cgcctccagcgcgagcttggcatcagcttcatccacgtcacccacgggcaggaggaggcg
ctggcgctcgccgacctcgtcgtggtgatgaacaacgggcgcatcgcccaggccggctcc
ccgcgcgaggtgttcaaccggccgcgcgacgccttcgtcgcccggttcatcggcgggcac
aatgtcctgtcgtccctcgacggagccgccggccggcagttcgcggtccgcaccgacaag
atccgcatccttccagaccgggcggccgcaggccccaacagcttcaccggcacggtccgg
ctggtcgagtaccagggaccgatggtccatctgcgcctggcatccccgggcgtcgaggag
ttcgccgtgaccgtcaccgaacaggccttcttcgcggccccgctcaacgccggcgagagg
gtcaccgccgtctgggccgaggaagacatgcacccgctcgccgcctga
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