Skermanella rosea: JL101_009905
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Entry
JL101_009905 CDS
T07666
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL101_009905 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_009905 (xylF)
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
JL101_009905 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_6
Peripla_BP_1
Peripla_BP_3
ABC_sub_bind
FGGY_N
Motif
Other DBs
NCBI-ProteinID:
UEM05727
LinkDB
All DBs
Position
complement(2163602..2164648)
Genome browser
AA seq
348 aa
AA seq
DB search
MNAIKHALMGVGAVLVMTASTGAWAQKVVVGVSWSNFQEERWKTDEAAIKARLAELGADY
ISADAQSSPSKQLADVESLITRGATALIVLAQDNNAIMPAISKATAEGIPVVGYDRLIEA
PGVFYLTFDNKEVGRIQAREILKVKPQGNYVFIKGSAADPNADFLHSGQVEVLKPSIDKG
DIKVVGEQYTDGWLPENAQRNMEQILTANNNKVDAVVASNDGTAGGAIAALSAQGLQGIP
VSGQDADQAALNRVARGLQTVSVWKDSRELGKTAANIAVELAKGAEASQIKGATKWNQGA
KGVELDAIFLTPIPITKDNLNLVIDAGWVTKAVACQGVDKAKAPKACM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctatcaagcatgcgctgatgggcgtgggcgcggtgctcgtcatgacggcatcg
accggggcctgggcgcagaaagtcgtcgtcggggtaagctggtccaacttccaggaggaa
cgctggaagaccgacgaggccgccatcaaggcccgcctggccgagttgggcgccgactat
atcagcgccgacgcgcagagctcgccttcgaagcagctcgccgacgtcgagagcctgatc
acccgcggggccaccgcgctgatcgtgctggcccaggacaacaacgccatcatgccggcg
atttccaaggcgaccgccgagggcatccccgtggtggggtatgaccgcctgatcgaggcg
cccggcgtgttctacctgaccttcgacaacaaggaggtcggccgcatccaggcccgcgag
atcctgaaggtcaagccgcagggcaactacgtcttcatcaagggcagcgccgccgatccc
aacgcggacttcctgcattccggccaggtcgaggtgctgaagccgtcgatcgacaagggc
gacatcaaggtcgtcggcgagcagtacaccgacgggtggctgcccgaaaacgcccagcgg
aacatggagcagatcctgaccgccaacaacaacaaggtggacgcggtcgtcgcctccaac
gacggcacggcgggcggtgccatcgccgcgctctccgcccagggcctgcagggcatcccc
gtgtccggccaggacgccgaccaggcggcgctcaaccgggtggcccgcggcctgcagacc
gtcagcgtctggaaggattcgcgcgagctcggcaagaccgcggccaacatcgccgtggaa
ctcgccaagggcgccgaggcctcgcagatcaagggcgccaccaagtggaaccagggcgcc
aagggcgtcgagttggacgcgatcttcctgaccccgatcccgatcaccaaggacaacctc
aacctggtgatcgatgcgggctgggtgaccaaggccgtggcctgccagggtgtcgacaag
gccaaggctcccaaagcctgcatgtga
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