Skermanella rosea: JL101_010325
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Entry
JL101_010325 CDS
T07666
Name
(GenBank) RlmE family RNA methyltransferase
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sroe03009
]
JL101_010325
Enzymes [BR:
sroe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
JL101_010325
Ribosome biogenesis [BR:
sroe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JL101_010325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_23
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
UEM05800
LinkDB
All DBs
Position
2257352..2258092
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AA seq
246 aa
AA seq
DB search
MTSKSSGPNTPSGRNFGVRVKTAKKRSLSSTLWLQRQLNDPYVAEAQKRGYRSRAAFKLL
QLDDKFRMLAPGKRVVDLGAAPGGWTQVAVERVKPQNGKGKVVGLDILEMEPVEGAITFQ
CDFNDDDAPDRLKEALDGPADIVLSDMAAPTTGHPQTDHIRIMALAELAYDFAAQVLAPG
GAFVAKVFQGGTERELLDRLKRDFASVKHAKPPASRADSAETYVVATGFRGASADHLRGL
GADGSE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaaatcctccggaccgaacacgcccagcggccgcaatttcggcgtgcgggtg
aagaccgccaagaagcgctccctgtcgtccaccctgtggcttcagcgccagctcaacgat
ccctatgtcgcggaagcgcagaagcgcggctaccgcagccgcgccgcgttcaagctgctc
cagctcgacgacaagttccgcatgctggcgccgggcaagcgggtggtggacctgggcgcc
gcccccggcggctggacccaggtggcggtggagcgggtgaagccgcagaacggcaagggc
aaggtcgtcggccttgacatattggagatggagccggtcgagggcgccataaccttccag
tgcgacttcaacgacgacgacgcgcccgaccggctgaaggaagccctggacgggccggcc
gacatcgtgctcagcgacatggcggcgccgaccaccggccatccccagaccgaccatatc
cggatcatggccctggccgagctggcctatgacttcgccgcccaggtgctggcgcccggc
ggcgccttcgtcgccaaggtgttccagggcggcacggagcgggagctgctggaccggctg
aagcgggacttcgcgtcggtcaagcacgccaagccgccggccagccgagcggattccgcg
gagacctacgtggtggcgaccggcttccgcggcgcgtcggccgatcatctccggggtctg
ggagccgacgggagcgagtag
DBGET
integrated database retrieval system
