Skermanella rosea: JL101_012255
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Entry
JL101_012255 CDS
T07666
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sroe
Skermanella rosea
Pathway
sroe02010
ABC transporters
sroe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL101_012255
03070 Bacterial secretion system
JL101_012255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_012255
02044 Secretion system [BR:
sroe02044
]
JL101_012255
Transporters [BR:
sroe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JL101_012255
Secretion system [BR:
sroe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JL101_012255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_22
ABC_ATPase
DUF87
nSTAND3
NB-ARC
Zeta_toxin
PRK
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UEM06168
LinkDB
All DBs
Position
complement(2659820..2662030)
Genome browser
AA seq
736 aa
AA seq
DB search
MTAPVAARAEGGTDVPVPTAVRCLLLVARLHGAGADVDRVIRTLMPGREPSAGELVRAAR
TAGLEASSHVGLDWERLRALASSAPVIAMLRNGNAVVVHGIAADGGTAVVLDPLADRPAP
LVLPRARFEAAWTGVAVLILPPAASRPSPPADRDGERRFGLGWFVPELLRQRALMGDVVL
AALMIHAIALAVPVFFQIVVDKVLVHEGFSTLAVLGVGIVAAILVEAVLGFLRGTLLLHA
TTKVDIRVAARTFAHLLSLSPAFFETSAAGVLAKHMQQAERVREFLTGRMMLTLLDASVL
MVFLPVLAFYSPHLTAVVLGFSATMAAAVGVLIVPYQRRLRRLYRAEGERQALLVETIHG
MATVKALGLEPERRRAWEDGAADAVTHHFEVGRIGVVARTASALLEKLMTVAIVWLGALA
VIDQRMTVGELVAFQMLASRVSAPLVQIVSLVHEYQEAALSVRMLGEIMDAPPERGSAEG
LRPDLAGGIEFRGVTFRYPGRDPGTPEPALADVSATIRAGQFVGVVGRSGSGKTTFARLI
QGFHAAEAGLILLDGHDIREIDLAHLRRSIGVVPQDAFLFRGTIRENIALSRPDAPPGEV
AEAAGLAGAAEFIQRLPHGFDTMLEEGAVNLSGGQKQRLSIARALLRRPPILILDEATSA
LDPDSEAEVQANLHRIARGRTTLLVSHRLTTLRDADLILVFEHGRIIDSGRHDDLVERCA
LYRQLWTQQTSRIASA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacagctccggtggcagcacgcgcggagggcggaacggacgttccagtcccgaccgcc
gtccggtgcctcctgttggtggcacgcctgcatggggccggtgccgatgtcgaccgggtc
attcgaaccctgatgccgggtcgcgagccttcggccggagaactcgtccgcgccgcccgg
acggccggtcttgaagcctcatcgcacgtcgggctggattgggaacgcctccgcgccctt
gcttcctcggcacccgtcatcgcgatgctgcggaacggcaatgcggtcgtcgtccatggc
atcgcggcggacggcggtaccgccgtggtgctggaccccctggcggatcgccctgcgccg
ctggtgctgccgcgagcacggttcgaagccgcatggaccggcgtggccgtgctgatactg
ccgccggcggcgtcccgtccgtccccgccggcggaccgtgacggagagcgccggttcgga
ctgggctggttcgtgcccgaactgctgcggcagcgcgccctcatgggcgacgttgtcctg
gccgccctgatgattcatgccatcgcgctcgctgtgccggtcttcttccagatcgtcgtc
gacaaggtgctggtccacgagggtttctccaccctggcggtgctcggcgtcgggatcgtc
gcggcgatcctggtggaggccgtactgggattcctgcgcgggacgctgctgctccacgcc
acgaccaaagtggatatccgggtcgcggccaggaccttcgcccatctgctgtccctgtcg
cccgccttcttcgagacatcggccgccggggtgctcgcgaagcacatgcagcaggccgaa
cgcgtccgggagttcctgacgggccggatgatgctgacgctgctggatgcttccgtgctg
atggtgttcctgccggttctcgccttctacagcccgcacctgaccgccgtggtgcttgga
ttctccgccaccatggcggcggcggtcggcgtgctcatcgttccctaccagcgccgcctc
cgtcggctttacagggccgagggcgagcggcaggccctgttggtcgagacgatccacggc
atggcgacggtgaaggcgctgggcctcgaaccggagcgccgccgcgcctgggaggatggc
gccgcggacgccgtcacgcatcatttcgaagtcggaaggatcggcgtggtcgcccgcacg
gcgtcagccctgctggagaagctgatgacggtcgccatcgtctggctgggcgcgctcgcg
gtgatcgaccagcgaatgacggtgggcgaattggtcgccttccagatgctggcttcccgg
gtcagcgcgccgctggtccagatcgtttcgctggtacacgagtaccaggaggccgccctg
tcggttcgcatgctgggagagatcatggacgcgccgcccgagcgcggttcggcggaaggc
ctgcggccggacctcgccggagggatcgagttccgcggagtcaccttccgctatccgggc
cgggatccgggaacgccggaaccggcgctcgccgacgtctccgcgacgatccgggcaggt
cagttcgtcggcgtggtcggccgaagcggatcgggcaagaccaccttcgcgcggctgatc
caggggttccacgcggccgaggctgggctgatcctgctggacggccacgacatccgggag
atcgacctggcccaccttcgccgcagcatcggcgtggtgccgcaggacgccttcctgttc
cgcggcaccatccgggagaacatagcgctttccaggccggatgcccccccgggcgaggtc
gcggaggcggccgggctggccggggcggcggaattcatccagcggctgccgcacgggttc
gacacgatgctggaggaaggggcggtcaacctgtccggcggccagaagcaacggctgtcg
atagcccgtgccctgctccgccggccgcccatcctgatcctggacgaggcgaccagcgcg
cttgacccggacagcgaggccgaggtccaggccaaccttcaccggatcgcccgcggccgg
acgacactcctggtttcccatcggctgaccacgcttcgcgacgccgacctgatcctggtg
ttcgagcacggccggatcatcgacagcgggcggcatgacgatctggtcgagaggtgcgcg
ctttaccggcagctctggacccagcagaccagccggatagcctcggcatga
DBGET
integrated database retrieval system
