Skermanella rosea: JL101_012305
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Entry
JL101_012305 CDS
T07666
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sroe
Skermanella rosea
Pathway
sroe00010
Glycolysis / Gluconeogenesis
sroe00020
Citrate cycle (TCA cycle)
sroe00260
Glycine, serine and threonine metabolism
sroe00280
Valine, leucine and isoleucine degradation
sroe00310
Lysine degradation
sroe00380
Tryptophan metabolism
sroe00620
Pyruvate metabolism
sroe00630
Glyoxylate and dicarboxylate metabolism
sroe00640
Propanoate metabolism
sroe00670
One carbon pool by folate
sroe00785
Lipoic acid metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
sroe01210
2-Oxocarboxylic acid metabolism
sroe01240
Biosynthesis of cofactors
Module
sroe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sroe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sroe_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sroe_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JL101_012305 (lpdA)
00020 Citrate cycle (TCA cycle)
JL101_012305 (lpdA)
00620 Pyruvate metabolism
JL101_012305 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JL101_012305 (lpdA)
00640 Propanoate metabolism
JL101_012305 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JL101_012305 (lpdA)
00280 Valine, leucine and isoleucine degradation
JL101_012305 (lpdA)
00310 Lysine degradation
JL101_012305 (lpdA)
00380 Tryptophan metabolism
JL101_012305 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JL101_012305 (lpdA)
00670 One carbon pool by folate
JL101_012305 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sroe04147
]
JL101_012305 (lpdA)
Enzymes [BR:
sroe01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JL101_012305 (lpdA)
Exosome [BR:
sroe04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JL101_012305 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
DAO
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
2-Hacid_dh_C
Lys_Orn_oxgnase
FAD_binding_3
NAD_binding_7
3HCDH_N
Thi4
SUFBD_core
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
UEM06175
LinkDB
All DBs
Position
2670711..2672114
Genome browser
AA seq
467 aa
AA seq
DB search
MADTQFDLIVIGGGPGGYVAAIRAAQLGMKTAVVEREHLGGICLNWGCIPTKALLRSAEV
SHLLHHLDEYGFSAKEVSFDLQKVVKRSRGVASQLSGGVKHLLKKNKVTVIDGHATLLGK
GRIKVEKDGTTTVGEFQAKHIIIATGARAREFPNMKADGKLVWTYRHAMVPDTMPKSILV
IGSGAIGIEFASFYLNMGAKVTVAEMVDRILPAEDEEISAMARKSFEKQGMKIYTGAKVG
EFQKGADSVTTTIEANGKTETITVDRVILAVGIVGNVENIGLENTKVKTEKSHILVNEWL
ETDEPGLYAIGDVVGAPWLAHKASHEGVICVEHIAGIKEAHPIDVRNIPGCTYSHPQVAS
VGLSEAKAKEAGYEVKVGRFPFIGNGKAIALGEPEGMVKTVFDAKTGELLGAHMIGAEVT
ELIQGYGIAKTMETTEAELMHTIFPHPTLSEMMHESVLAAYGRAIHY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatactcaattcgacctcatcgtcatcggcggcggacccggcggctacgtcgcc
gccatccgggcggcccagctcggcatgaagaccgccgtcgtcgagcgcgagcacctgggc
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgaggtg
tcgcacctgctgcaccacctggacgaatacgggttctccgccaaggaggtcagcttcgac
ctccagaaggtggtcaagcggtcgcgcggcgtcgcctcccagctctccggcggcgtcaag
cacctgctgaagaagaacaaggtcaccgtcatcgacggccatgccaccctgctcggcaag
ggcaggatcaaggtcgagaaggacggcaccaccaccgtcggcgagttccaggccaagcac
atcatcatcgcgaccggtgcccgcgcccgcgaattcccgaacatgaaggccgacggcaag
ctggtctggacctatcgccacgcaatggtcccggacaccatgcccaagtcgatcctggtg
atcggttcgggcgccatcggcatcgagttcgccagcttctacctgaacatgggcgccaag
gtcacggtcgccgagatggtcgaccgcatcctccccgcggaggacgaggaaatcagcgcc
atggcccgcaagtcgttcgagaagcagggcatgaagatctacaccggtgccaaggtcggt
gagttccagaagggcgccgacagcgtcacgaccaccatcgaggccaacggcaagaccgag
accatcacggtggaccgggtcatcctggcggtcgggatcgtcggcaacgtcgagaacatc
ggcctcgagaacaccaaggtgaagacggagaagtcgcacatcctggtgaacgagtggctg
gagaccgacgagcccggcctctacgcgatcggcgacgtggtcggcgctccctggctggcc
cacaaggcgagccacgagggcgtgatctgcgtcgagcacatcgccgggatcaaggaagcc
cacccgatcgacgtccgcaacatcccgggctgcacctactcgcacccgcaggtggccagc
gtcggcctgagcgaggcgaaggcgaaggaagcgggctacgaggtcaaggtcggccgcttc
ccgttcatcggcaacggcaaggcgatcgctctcggcgagcccgagggaatggtcaagacg
gtgttcgacgccaagacgggcgagctgctgggcgcccacatgatcggcgccgaggtgacc
gagctgatccagggttacggcatcgccaagaccatggagacgaccgaagccgaactgatg
cacaccatcttcccgcatccgacgctgtcggagatgatgcacgagtccgtcctcgccgcc
tacggcagggcgatccactactga
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