Skermanella rosea: JL101_012475
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Entry
JL101_012475 CDS
T07666
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sroe01011
]
JL101_012475
Enzymes [BR:
sroe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JL101_012475
Peptidoglycan biosynthesis and degradation proteins [BR:
sroe01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JL101_012475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
UEM06208
LinkDB
All DBs
Position
complement(2706030..2707001)
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AA seq
323 aa
AA seq
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MAGKAVASNSVNALLVATAIIALSACSTQTTPSKVAGQGGTRSAMGGYKVGEPYQIKGVW
YYPKEDFGYDETGIASWYGPGFHAETTANGERFDQNELTGAHKTLPMPSLVRVTNLENGR
SIIVRINDRGPFVPGRIVDLSRRGAQLLGFEAQGSAKVRVAILPDESRAVAAAARAGQAG
VDIAQVSPDGAPVPVAAPRAVVQVEGAQAPIQVAERRPFDPAQTLPGATVDGRFMPAPVV
AELPVRSPGRIYVQAGAFTVYENANRLRARLSGLGASRIDPAMVGDTQYFRVRVGPLPTV
EAADQVLTQVIEAGSNGARVVVD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaagctgtggccagcaattcggtgaatgctcttctggtggccaccgccatc
atcgccctgtcggcatgctcgacccagacgacgccgtccaaggtggccggccagggcggg
acgcggtcggcgatgggtggctacaaggtcggggagccatatcagatcaagggggtctgg
tactaccccaaggaggatttcggctacgacgagaccgggatcgcgtcgtggtacggtccc
ggcttccacgccgagaccacggcgaacggcgagcgattcgaccagaacgagctgaccggc
gcgcacaagacgctgccgatgccgagcctcgtgcgggtgacgaacctggagaacggccgg
tccatcatcgtccgcatcaatgatcggggtcccttcgtgccgggccgcatcgtcgacctg
tcgcggagaggcgcccagctgctcggattcgaggcgcagggcagcgcgaaggtccgcgta
gcgatcctgcctgacgagagcagggcggtcgccgccgccgcgcgggcagggcaggcgggc
gtcgacatcgcgcaggtgtccccggacggagctcccgtgccggtcgcggccccgcgggcg
gtcgtgcaggtcgaaggagcgcaggccccgatccaggtcgcggagcggcggccgttcgat
ccggcgcagacgcttccgggcgccacggtggacggcaggttcatgccggctcccgtcgtc
gccgagcttccggtgcgctctccgggcaggatctacgtgcaggccggggccttcacggtg
tatgagaacgccaacaggcttcgggcgcggctgtcgggcctgggggcttcccggatcgac
ccggcgatggtcggcgacacccagtatttccgggtccgtgtcggtccgctcccgaccgtc
gaggcggcggaccaggtgctgacacaggtgattgaggccggcagcaacggtgcaagggtc
gtcgtcgactag
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