Skermanella rosea: JL101_014250
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Entry
JL101_014250 CDS
T07666
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sroe03000
]
JL101_014250
Transcription factors [BR:
sroe03000
]
Prokaryotic type
Helix-turn-helix
XRE family
JL101_014250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
MFS_4
HTH_37
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UEM01183
LinkDB
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Position
3071894..3073378
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AA seq
494 aa
AA seq
DB search
MQKKLFLGYKLRRLREQRGLTQAALAKLLELSPSYLNQIENNQRPLTLPVLLRIGTIFEI
DLATFVEDEEARLVSDLREALADPLFAGGPIGMSELRNAAAASPELARRSLVLHQAYQKL
QERVQSLAETLSSHERGQALAGPQFPYEEVRDYFHYSNNYVGPLDEAAEKLSEQEGFRPA
DMQTDLMNHLKARHDVRIRIVADHDGETAMRRYDSASGTLFLSALLSGPSRAFHLAHQIA
LLGQSETIEQLIAEANFTTEDAKSICRVGLANYFAGALVMPYRAFAAQARAVRHDIEQLQ
SRFAVSFEQVCHRLSTLQRPGARGVPFYFVRVDMAGNITKRHSATRFHFARFGGACPLWN
VHEAFAQPGKILVQLARMPDNVAYICVARSVTKRAGAYLKPSRQFAIGLGCEAAYAPEVV
YSAGLDISNADAAVPIGVSCRICEREDCQQRAFPPIGSHLTVNEHHRSFVPYLFTQAGED
DAGAVTGAAVEGVG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagctttttctcggctacaagctgcgccggctgcgcgaacagcgcggattg
acgcaggcggcacttgcgaaactgctggaactgtcgccgagctatctgaaccagatcgag
aacaaccagcgtcccttgacgctgccggtgctgctgcgaatcgggacaatcttcgagatc
gacctcgcgaccttcgtcgaggacgaggaggcccggctggtctccgacctgcgggaggcg
ctcgccgaccccctgttcgccggcgggccgatcggcatgtcggagctacggaacgctgcc
gccgcctcgccggagctggcgcggcgttcgctggtactccaccaagcctaccagaagctc
caggagcgggtccaatcgctggccgagaccctgtcgagccacgagcgcgggcaggcgctg
gccgggccgcagttcccgtacgaggaggtacgggactatttccattattccaacaattat
gtcggcccgctggacgaggctgcggagaagctgtcggagcaggagggcttccgcccggcc
gacatgcagaccgacctgatgaaccacctcaaggcccgccacgacgtgcggatcaggatc
gtcgccgaccatgacggcgagacggcgatgcggcgctacgactcggcgagcggcacgctg
ttcctgtcggccctgctgagcgggccgagccgggccttccacttggcgcaccagatcgcg
ctgctcggccagagcgagaccatcgagcaactgatcgccgaggcgaacttcaccaccgag
gatgccaaatcgatctgccgcgtcgggctcgcgaactatttcgccggcgcgctcgtgatg
ccgtaccgcgcgttcgccgcacaggccagggcggtccgccacgacatagagcagctccag
agccgcttcgcggtcagcttcgagcaggtctgccaccggctcagcacgctccagcgaccg
ggagctcgcggcgtgcctttctatttcgtccgggtggacatggcaggcaacatcaccaag
cggcacagcgccacgcggttccacttcgcgcggttcggcggcgcctgcccgctgtggaac
gtccacgaggccttcgcccagccgggcaagatcctggtccagctcgcccgcatgccggac
aacgtcgcctatatctgcgtcgcccgcagcgtgaccaagcgggccggcgcctacctgaag
ccgagccgccagttcgccatcggcctgggctgcgaggccgcctacgcgccggaagtcgtc
tattccgccgggctcgacatcagcaatgccgacgccgccgtgccgatcggggtgagctgc
cggatctgcgagcgcgaggactgccagcaacgggcattcccgccgatcggaagccacctg
acggtgaacgagcatcaccgcagcttcgtcccctacctgttcacccaggcgggcgaggac
gatgcgggggcggtcacgggagcggcggtcgagggtgtgggatga
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