Skermanella rosea: JL101_014290
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Entry
JL101_014290 CDS
T07666
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroe03032
]
JL101_014290
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_014290
Enzymes [BR:
sroe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JL101_014290
DNA replication proteins [BR:
sroe03032
]
Prokaryotic type
DNA Topoisomerases
JL101_014290
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL101_014290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UEM01191
LinkDB
All DBs
Position
3084520..3085617
Genome browser
AA seq
365 aa
AA seq
DB search
MQDGATRVNEEEGTIVDPPAAAEQAGLVYVSDEEPGIRRRKSGKGFSYRKPDGGVLKDKA
DLDRIKSLAIPPAYTDVWICPDPNGHIQATGRDDRGRKQYRYHPRWREVRDSTKYERMLE
FGRALPAIRERIAADMGKRGLPREKVLATVVHLLENTLIRVGNATYSKENKSFGLTTLLD
RHVEVDGGKMRFEFKGKSGKVWNLQVKDRRIARIVKSCQDVPGQHLFQYLDDDGTRHGVT
SQDVNDYLREISGKDFSAKDFRTWAGTVLAALALAEFESFDTKAAAKRNLRAAIERVSAR
LGNTPAICRKCYIHPQVLDCYLEGDLVTQLKDQVEDDLRSGLDALKPEEAAVLAFLHRRL
EREAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggcgcgacccgcgtgaacgaagaagaaggcaccatagtcgacccgcccgcc
gccgccgaacaggccgggctggtctatgtctcggacgaggaaccgggaatccggcggcgg
aagtcgggcaaggggttcagctatcggaaacccgacggtggcgtcctgaaggacaaggcg
gacctggatcggatcaagtcgctggcgatcccgccagcctatacggacgtctggatctgc
ccagacccgaacggacacatccaggcgaccggccgcgacgaccggggccgcaagcagtac
cgttaccatccccgctggcgggaggtgcgcgacagcaccaagtacgagcggatgctggag
ttcggccgggcgcttcccgcgatccgggaacgcatagcggccgatatgggcaagcgcggg
ctgccgcgcgaaaaggtgctggcgaccgtcgtccacctgctggagaacaccctgatccgc
gtcggcaacgcgacatattcgaaggagaacaagagcttcggcctgaccaccctgctggac
cgccacgtggaggtggacggcggcaagatgcgattcgagttcaagggcaagagcggcaag
gtctggaacctgcaggtcaaggaccgccggatcgcccgcatcgtaaagtcctgccaggac
gtgccgggccagcacctgttccagtatctcgacgacgacggcacccggcacggcgtcacc
tcgcaggacgtgaacgactatctgagggagatcagcgggaaggatttctccgccaaggat
ttccggacctgggccggtaccgtgctggcggcgctggcgctggccgagttcgaaagcttc
gacaccaaggctgccgccaagcggaacctgcgcgccgccatcgaacgggtctccgcccgg
ctcggcaacacgccggcgatctgccggaaatgctatatccatccccaggtgctcgactgc
tatctcgaaggggatctggtcacccagttgaaggatcaggtagaagacgaccttcgctcc
ggcctcgacgccctcaagccggaggaagcggccgtgctggcctttctccatcgccgcctc
gagcgcgaagccgcctga
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