Skermanella rosea: JL101_014655
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Entry
JL101_014655 CDS
T07666
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sroe
Skermanella rosea
Pathway
sroe00730
Thiamine metabolism
sroe01100
Metabolic pathways
sroe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JL101_014655 (thiC)
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JL101_014655 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UEM01255
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All DBs
Position
complement(3153267..3155072)
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AA seq
601 aa
AA seq
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MPKDSNPTFTVSTGPLPASRKVHVPGTQYPDLRVALREIDLEPGCGEPPVRVYDSSGPYS
DPAAEIDIARGLPPLRAGWIAARGDTEAYDGRPVRPEDNGLRQGQRSNLEEFSGPARRPL
RARGGAAVTQMAYARRGIVTPEMEYVAIRENLGRQAALDAVRDGRSFGAAIPDHVTPEFV
RDEVAKGRAIIPANINHPEIEPMIIGRNFLVKINANIGNSAVASSVAEEVEKMVWATRWG
ADTVMDLSTGANIHTTREWIIRNAAVPIGTVPIYQALEKVGGRAEELTWDIYRDTLVEQA
EQGVDYFTIHAGVRLAHIPLTARRVTGIVSRGGSILAKWCLAHHRENFLYTRFEEICEIM
RAYDISFSLGDGLRPGSIADANDAAQFAELETLGELTQVAWKHDVQVMVEGPGHVPMHRI
KENMDRQLDVCREAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLG
LPDRDDVKVGVVTYKIAAHAADLAKGHPAARLRDDALSRARFDFRWRDQFHLSLDPETAE
RFHDQTLPAEGAKSAHFCSMCGPKFCSMKITQEVREYAASGMAGMSESFRAGGSQIYRPV
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagacagcaatccgaccttcaccgtttccactgggccgctgcccgcgtcgcgc
aaggtgcatgttccgggcacccagtacccggacctgcgggtcgcactgcgcgagatcgac
ctggagcccggctgcggcgaaccgccggtccgtgtctatgacagctccggcccctacagc
gatccggccgctgaaatcgacatcgcccgcggcctgcccccgttgcgcgccggctggatc
gcggcccgcggcgataccgaagcctatgacggccggccggtcaggccggaggacaacggc
ctgcgccagggccaacgctccaacctggaggagttctccggccccgcccgcaggccgctg
cgggcacggggcggtgccgccgtgacacagatggcctatgcgcggcgcggcatcgtcacg
ccggagatggagtatgtcgcgatccgggagaacctcggccggcaggcggcgctcgacgcc
gtgcgcgacggccggtccttcggcgccgcgatcccggaccatgtcaccccggaattcgtg
cgcgacgaggtggcgaagggcagggcgatcatcccggccaacatcaaccatccggagatc
gagccgatgatcatcggccgcaatttcctggtcaagatcaacgccaacatcggcaattcc
gccgtcgcctcctccgtggcggaagaggtcgagaagatggtctgggcgacccgctggggg
gccgacaccgtgatggacctctcgaccggcgccaacatccacaccacccgcgagtggatc
atccgcaatgccgccgtgccgatcggcaccgtcccgatctaccaggccttggagaaggtc
ggcggccgggccgaggagctgacctgggacatctaccgcgacaccctggtcgagcaggcg
gagcagggcgtggactacttcaccatccatgccggcgtccggctcgcccatatcccgctg
accgcgcggcgggtgaccggcatcgtctcgcgcggcggttcgatcctggccaagtggtgc
ctggcgcaccaccgggagaacttcctctatacccggttcgaggagatctgcgagatcatg
cgggcctacgacatcagcttctcgctgggtgacgggcttcggccgggttccatcgccgac
gccaacgacgcggcgcagttcgccgagctggagacgctgggtgaactgacgcaggtcgcc
tggaagcacgacgtgcaggtcatggtggaggggccgggccatgtgccgatgcacaggatc
aaggagaacatggaccggcagctcgacgtctgccgcgaagcgcccttctacacgctcggc
ccgctgaccaccgacatagcgcccggctacgaccacatcaccagcggcatcggcgccgcc
atgatcggctggttcggcacggcgatgctgtgctacgtgacgccgaaggagcatctgggc
ctgcccgaccgcgacgacgtgaaggtcggggtcgtcacctacaagatcgcggcccatgcc
gccgaccttgccaagggccatccggcggccaggctgagggacgacgcgctcagccgcgcc
cggttcgatttccgctggcgcgaccagttccacctgtcgctcgatccggaaacggcggag
cggttccacgaccagaccctgccggccgaaggcgccaagtcggcgcacttctgctccatg
tgcggcccgaaattctgctccatgaagatcacgcaggaggtgagggagtatgccgcctcc
ggcatggccgggatgtcggagagcttccgggccggcggctcgcagatctatcggccggtc
ggctga
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