Skermanella rosea: JL101_014745
Help
Entry
JL101_014745 CDS
T07666
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_014745
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JL101_014745
DNA repair and recombination proteins [BR:
sroe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JL101_014745
Prokaryotic type
JL101_014745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UEM01273
LinkDB
All DBs
Position
3173042..3174514
Genome browser
AA seq
490 aa
AA seq
DB search
MTSRSPVIVWFRHDLRLADNPALHRAVESGAPVIPLYVLDDGGADGVRPPGGAGSWWLHH
SLERLGAALARLGSPLVLRRGPAGQILDRLIAETGAGLVVWNRECEPSAARRDAAVREKL
AECGVAVESFNGGLLVEPEQVRSKAGTPFKVFTPFWKTLSTAHDPARPLPAPAALKPPGS
AVASDVLAAWGLLPTSPDWAGGLRDDWTPGEEAAAGRLADFLDAILRDYRTGRDRPGRDG
TSRLSPHLHWGEISPRQVWHAARHRAEAATGLEPAVEAFLREIGWREFTHGLLLTNHDMR
TEPMDSRFKALPWRNDDAGLKAWQRGRTGYPIVDAGMRQLWRTGWMHNRVRMIVGSFLVK
DLLLPWQSGEEWFWDTLVDADAANNSANWQWIAGCGADPAPFFRVFNPVLQGRKFDPDGS
YVRRYVPELERLPDRYIHEPWSAPAEVLAKAGVTLGRTYPKPIVDHGAARDRALEAFRAV
KAAGKVAPPG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcgatctcccgtcatcgtctggtttcgccacgatctgcgccttgccgacaat
cccgcccttcaccgcgcggtggagagcggagcgccggtgattcccttgtatgtgcttgat
gatggcggtgccgacggcgtgaggccgccgggaggcgccgggtcctggtggcttcaccat
agcctggagaggctgggtgcggcgctcgcccggctgggctcgccgctggtgctgaggcgg
gggccggccgggcagatcctcgatcgcctgatcgccgagaccggggccggccttgtggta
tggaaccgcgaatgcgagccgtcagcggcccggcgggatgctgccgtacgggagaagctg
gcggagtgcggcgtcgcggtcgagagtttcaacggcggcttgctggtcgagcccgagcag
gtccggtccaaggccggaacgcccttcaaggtcttcacgccgttctggaagacgctttcc
accgcgcatgatccggcgcgcccgctgcccgcccccgcggcgctgaagccgccgggaagt
gcggtggcttcggatgtcctggccgcctggggattgctgccgacctcgcccgactgggcc
ggcggtctgcgggacgactggactcccggggaggaggccgcggcggggcggctcgcggat
ttcctggacgcgatcctgcgggattacaggaccggccgcgaccgtcccggccgggacggc
acctcacggctgtcgccgcacctgcactggggcgagatctccccccgccaggtctggcac
gcggcgcggcatcgggccgaagcggcgaccgggctggaacctgcggtggaggccttcctg
cgcgagatcggctggcgggaattcacccacgggcttctgctgaccaaccacgacatgagg
acggagccgatggacagtcggttcaaggccctgccctggcggaacgacgatgccggcctg
aaggcatggcagcgggggcggacagggtatccgatcgtcgatgccgggatgcgccagctc
tggcggacgggatggatgcacaaccgggtgcggatgatcgtcggctcctttctggtcaag
gacctgctgctgccgtggcagtcgggggaggaatggttctgggacacgctggtggatgcg
gatgccgccaacaacagcgcgaactggcagtggatcgccggctgcggcgccgatcccgcg
ccgttcttccgggtgttcaaccccgtcctccagggccgcaagttcgaccccgacggcagc
tatgtgcggcggtacgtgccggaactggaacggctgcccgaccgctacatacacgagccc
tggagcgccccggccgaggttctggcgaaggccggcgtgacgctgggccggacctatcca
aagccgatcgtggaccatggtgcggcacgcgaccgggcgctggaggccttccgggcggtc
aaggcggcggggaaagtcgctcccccgggctga
DBGET
integrated database retrieval system
