Skermanella rosea: JL101_015500
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Entry
JL101_015500 CDS
T07666
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sroe
Skermanella rosea
Pathway
sroe00300
Lysine biosynthesis
sroe00470
D-Amino acid metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01230
Biosynthesis of amino acids
Module
sroe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JL101_015500 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JL101_015500 (lysA)
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JL101_015500 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Thiopep_pre
Motif
Other DBs
NCBI-ProteinID:
UEM01414
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All DBs
Position
3332419..3333687
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AA seq
422 aa
AA seq
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MNPYFTYRDGVLHAENVALPALAAEVGTPFYCYSLAALEANYRAFATAFEGTDTGICYAL
KANSNLAVIRTLARLGAGADVVSEGEMRRALAGGVPADRIVFSGVGKTRGEMRAALEAGI
FQLNVESIPELEALSEVAASLGRTASIAIRVNPDVDAQTHAKIATGKKENKFGIDIDHAR
EIYARAAALPGIAPVAVAVHIGSQLTSLEPFRAAFERVVELVHALRADGHDIKRLDLGGG
LGILYRDEEVPAVDAYAGMVRSITGNLGCHVTLEPGRALVGNAGILVTRVIFRKTGLHRE
FLIVDAAMNDLIRPSLYDAWHTILPVIEPSSDAPRSPIDVVGPVCESGDTFAVQRVLPHL
DQEDLVAFLSAGAYGAVMSSSYNTRPLIPEVLVSGADHAVVRRRPTVEEMLAAERVPAWL
DP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttatttcacctatcgcgacggcgtgctgcatgccgagaatgtggcgctgccc
gccctcgcggcggaagtcggcacgcccttctactgctattccttggcggcgctcgaagcg
aactaccgggccttcgccacggccttcgaaggcaccgacaccggcatctgctacgccctg
aaggcgaactccaacctcgccgtgatccgcacgctggcccgcctcggcgccggcgccgac
gtggtgtcggaaggcgagatgcgccgggcgctcgccggcggcgtgccggcggaccggatc
gtcttctccggcgtcggcaagacccgcggggagatgcgggcggccctggaagccggcatc
ttccagctcaacgtcgaatcgatccccgaactggaagccctgagcgaggtcgccgcctcc
ctgggccggaccgcctccatcgcgatccgggtcaacccggacgtggacgcccaaacccac
gccaagatcgcgacaggcaagaaggagaacaagttcggcatcgacatcgaccacgcgcgc
gagatctatgcccgcgccgccgcgctgccggggatcgcccccgtggccgtcgcggtgcat
atcgggtcgcagctgaccagcctggagcctttccgcgccgccttcgagcgggtggtcgaa
ctggtccacgcgctccgtgccgacgggcacgacatcaagcgcctggacctgggcggcggc
ctcggcatcctgtatcgggacgaggaggtgccggcggtcgacgcctatgccgggatggtc
aggagcatcaccggcaatctgggctgccacgtgacgctggagcccggccgggcgctggtc
ggcaacgccggcatcctggtgacccgggtgatcttccggaagaccgggctacaccgggag
ttcctgatcgtcgacgcggcgatgaacgacctgatcaggccctcgctttacgacgcctgg
cacaccatccttcctgtaatcgaaccgtcgtccgacgcgccgaggtcgccgatcgacgtg
gtcggcccggtctgcgagtcgggggatactttcgcggtccagcgggtcctgccacatttg
gaccaagaagatctggtggcattcctgtcggcgggagcctacggcgcggtgatgtcgtcc
agctacaacacccgcccgctgatccccgaggtgctggtctcgggggccgaccatgcggtg
gtccgccggcggccgaccgtcgaggagatgctggcagcggaacgggtgccggcatggctt
gacccctga
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