Skermanella rosea: JL101_015570
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Entry
JL101_015570 CDS
T07666
Name
(GenBank) mechanosensitive ion channel family protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_015570
Transporters [BR:
sroe02000
]
Other transporters
Pores ion channels [TC:
1
]
JL101_015570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
UEM01427
LinkDB
All DBs
Position
complement(3347419..3349557)
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AA seq
712 aa
AA seq
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MTVFVRLILLVLLLGAGSGPGVASAQPAAPASGAGIDAVMQAFPDGLTPEQADALLAVMD
GEQVRAALRDRLLSETRSRSAAARPANPLAFHAERLDAVVRSYPRIPAALVDAFERPNGR
DAAIRPWRLAASLAFLFAAGTVVWAALARLLPAAPDSVVRSAARDLLRIAGFVTGLLLAY
AILRPTHPAAPAIFLAALQAALTVLVADLIFRALCAPGQADRRLLPVGERAATAIYRSGV
WVAVLSAALLGLFDLLNALGMAYDPLIALVLPVSTLPFLYLAVQLWSRRRDIAAMIGGFL
DLDLSASRGIGTGLVLATVYLAGLWLTLAAAALRLEPGTGFRLLASFALAVAVPVVALLL
HRPIARFHAAEEAGDGHASAITVRLMRAVWAALLVLSVVATAFIWGFDAERQTGPLGIAL
RLLFDAGVVLLLGYVGWALLIRSFDRLIASQNERDRRTAQRMATLLPLVRKFLQVALVAV
VVMIVLSSLGIAIGPLLAGAGVVGIAIGLGAQSTIADILSGIFFLLEDAFHIGDYVEVGQ
LRGTVENISLRSLKLRHHRGAVHTLPFGQIKALTNYTRDWALMRLEFRVPPETDLGLVKK
LVKRIGAELSEDPEMGPSFIEPLKSQGVRRVEDDAVIIGVKYIAKPGEQFTIRREAYQRI
IKAFNENGIDLVGRGVVVRVDDPNAASRAVGFAAVEAVRDSFEGAKHMKEQA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgttcgtccggctgatcctcctggtgctcctgctgggtgccgggtccggtccc
ggcgtcgcatccgcccagccggccgcgccggcatccggtgccggcatcgacgcggtgatg
caggcttttcccgacgggctgacgccggagcaggcggacgccctgcttgccgtcatggat
ggcgaacaggtccgggccgccctgcgcgacaggctgctgagcgagacccgaagccgcagt
gcggccgcccggcccgccaatcccctggcgttccatgcggagcgcctggacgccgtggtc
aggtcctacccccggataccggcggccctggtcgatgccttcgaacggccgaacgggcgc
gacgccgcaatccggccgtggcgcctggcggcgtcgctggcgttcctgttcgcggccggc
accgtcgtctgggccgcgctggcccggctgcttcccgcggctccggacagcgtggtgcgg
agcgcggctcgcgacctgctgcggatcgcagggttcgtcaccggccttctgctggcctat
gcgatcctgcgcccgacgcatcccgcggcacccgcgattttcctcgcggcgctccaggct
gccctgacggtgctggtcgccgacctgatcttccgggccctctgcgcgcccggacaggcg
gaccggaggctcctgccggtgggggagagggccgcgacggcgatctaccggtccggcgtg
tgggtcgccgtcctcagtgccgcgctgctcggcctgttcgacctgctgaacgccctgggc
atggcctatgacccgctgatcgcccttgtgctgccggtcagcaccctgccgttcctgtac
ctggcggtccagctctggagccggcgtcgggacatcgccgcgatgatcggcggtttcctg
gatctcgacctttcggccagccgcggcatcggcaccggtctggtgctggcgaccgtctat
cttgccggcctctggctgacgctcgcggcggcggcgctgcggctggagcccgggacgggc
ttccgcctgctcgccagcttcgccctggcggtcgcggttccggtggtcgcccttctgctc
caccgcccgatcgcccgtttccacgccgcggaggaagccggcgacggccacgcgtccgcg
atcacggtgcggctgatgcgcgccgtctgggctgccctgctggtgctgtcggtggtcgcg
acggccttcatctgggggttcgacgcggaacggcagaccggcccgctgggtatagcgttg
cggctgcttttcgacgccggcgtggtgctgctgctcggctatgtcggctgggcgttgctg
atccgaagcttcgaccgccttatcgcgtcccagaacgaacgcgaccgccggaccgcccag
cggatggcgaccctgctgccgctggtccgcaagttcctccaggtcgcgctggtggccgtc
gtcgtgatgatcgtgctgtcctccctggggatcgccatcgggccgctgctggcgggcgcc
ggggtggtcggcatcgcgatcgggttgggcgcgcagtcgaccatcgccgacatcctgtcc
ggcatcttcttcctgctggaggacgcctttcatatcggcgactatgtcgaggtcggccag
ctccggggcaccgtggagaacatctccctccgctccctcaagctgcgccatcatcggggc
gcggtccacacgctgccgttcggccagatcaaggccctgaccaactacacccgggactgg
gcgctgatgcggctggagttccgcgtgccgcccgaaaccgacctgggtctggtcaagaag
ctggtcaagcggatcggcgccgaactgtccgaagacccggagatggggcccagcttcatc
gagccgctgaaatcccagggcgtccgccgggtcgaggatgacgccgtgatcatcggcgtc
aaatacatcgccaagcccggagagcagttcaccatccgacgcgaggcctatcagaggatc
atcaaggccttcaacgagaacggcatcgaccttgtcggccggggcgttgtcgtccgcgtc
gacgatccgaacgccgccagccgcgccgtcgggttcgccgcggtcgaggcggtccgggac
tcgttcgagggcgcgaagcacatgaaggagcaggcatga
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