Skermanella rosea: JL101_016420
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Entry
JL101_016420 CDS
T07666
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sroe
Skermanella rosea
Pathway
sroe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JL101_016420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_016420
Enzymes [BR:
sroe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JL101_016420
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JL101_016420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ERM_helical
DUF6212
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
UEM06629
LinkDB
All DBs
Position
complement(3529537..3529788)
Genome browser
AA seq
83 aa
AA seq
DB search
MADSAIPPDVAALSFEDALGELERIVRQLEEGRAKLDDAISSYERGTALRRHCEAKLREA
QAKVDRITVAADGSIGAEPARIE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccgcaataccccccgatgtcgcagcgctgagtttcgaagacgctctcggc
gagctggagcggatcgtgcgccagctcgaggagggccgcgccaagctcgacgacgcgatc
tcgtcctacgagcgcggcacggcgctgcgccgccactgcgaggccaagcttcgcgaagcc
caggcgaaggtcgaccggatcaccgttgccgccgacggctcgatcggcgccgaacccgcg
cggatcgaatag
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