Skermanella rosea: JL101_020185
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Entry
JL101_020185 CDS
T07666
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sroe
Skermanella rosea
Pathway
sroe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL101_020185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sroe03019
]
JL101_020185
03110 Chaperones and folding catalysts [BR:
sroe03110
]
JL101_020185
03029 Mitochondrial biogenesis [BR:
sroe03029
]
JL101_020185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sroe04147
]
JL101_020185
Enzymes [BR:
sroe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JL101_020185
Messenger RNA biogenesis [BR:
sroe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JL101_020185
Chaperones and folding catalysts [BR:
sroe03110
]
Heat shock proteins
HSP60 / Chaperonin
JL101_020185
Mitochondrial biogenesis [BR:
sroe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JL101_020185
Exosome [BR:
sroe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JL101_020185
Exosomal proteins of other body fluids (saliva and urine)
JL101_020185
Exosomal proteins of breast cancer cells
JL101_020185
Exosomal proteins of colorectal cancer cells
JL101_020185
Exosomal proteins of bladder cancer cells
JL101_020185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UEM02303
LinkDB
All DBs
Position
4308559..4310187
Genome browser
AA seq
542 aa
AA seq
DB search
MMLHRAEARAALGRGVEKLTLAVQGTLGPKGMNAIIDRPIGTPIVSRDGVSIADEVELEC
RFENMGAQVVREVSKQTNEIAGDGTTTATVLANALIQGGLKVLENQGSPVDLVAGIDRAA
GAVIEALRKSAKPLSGHTQLEAVATIAATDPALGHLVAEALRRVGSDGIVEVTFGPGIET
TLEVVEGMSFDRGYISHHMVTDVETMRAVLDDPHILITDQRIASPDQIAHILTEVSATGH
PLLIIADELAPEVVVTLMGMRRNGAGLAVAVNPPEFGHWRKAMLEDIAILTGGRVIARDL
GGRLEQVTLEDLGSADQVRVGQSFTSLIRGHGDPELIRARRAQVQRQFDAAPPNIERDKY
TERLAKLTGGTATILAGGATPAEQKRRVQLLDDSLNAARAAMEEGVVPGGGTALIQAAPA
LDTLADQTSGGVRDGIRLFQRALAAPLGCIAENCGLAANDIAARAAEAPRGTGFDARTGQ
FTDLIEAGITDPVKVTTTAVRNASSAACLILNTHTLIADKPDMSDPTAGPALGAGAEKLG
RE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccaccgcgcggaggcgcgcgccgccctcggccggggcgtcgagaagctgacc
ctggcggtccagggcaccctcggccccaagggcatgaacgcgatcatcgaccggcccatc
ggcacgccgatcgtctcccgggacggggtcagcatcgccgatgaggtcgagctggaatgc
cggttcgagaacatgggcgcccaggtggtgcgggaggtgtccaagcagaccaacgagatc
gccggcgacgggaccaccaccgccaccgtgctggccaacgcgctgatccagggcgggctt
aaagtcctggagaaccagggcagcccggtggacctggtcgccggcatcgaccgggcagcg
ggagcggtcatcgaagcgctgcggaagtccgccaagccgctctccggccacacgcagctg
gaagcggtcgccaccatcgccgcgaccgatccggccctggggcatctggtcgccgaggcg
ctccgcagggtcggaagcgacggaatcgtcgaggtgaccttcggcccgggcatcgagacg
accctggaagtggtcgaaggcatgtcgttcgaccggggctacatctcccaccacatggtc
accgacgtggagaccatgcgggccgtcctggacgatccacacatcctgatcaccgaccag
cggatcgcctcgcccgaccagatcgctcatatcctgacggaggtctccgctaccggccat
cccttgctgatcatcgccgacgaactggccccggaggtcgtcgtgaccctgatgggcatg
cgccgcaacggcgcggggctggcggtcgcggtcaacccgccggaattcggccactggcgg
aaggccatgctggaggacatcgcgatcctgaccggcggacgggtgatcgcccgcgatctc
ggcggccggctggaacaggtcaccctggaagacctgggaagcgccgaccaggtccgggtc
ggccagagcttcacgtccctgatccgcggccacggcgatcccgagctgatccgcgcccgc
cgcgcccaggtgcagcgccagttcgacgcggctccccccaacatcgagcgggacaagtat
acagaacggctcgccaagctgaccggcggcaccgccaccatcctggccggcggggccacc
ccggcggagcagaagcgccgggtccagctgctcgacgacagcctcaacgccgcccgcgcc
gccatggaggaaggcgtcgtgcccggcggcggcacggcgctgatccaggcggcccctgcc
ctggacacgctggccgaccagacctccggcggggtccgcgacgggatccggctgttccag
cgcgcgcttgcggcaccgctcggctgcatcgccgagaactgcggcctcgcggcgaacgac
atcgcggcccgtgcggcggaggcgcccaggggcaccgggttcgacgcgcggaccggccag
ttcaccgacctgatcgaggccggcatcaccgacccggtcaaggtcaccacgacggcggtg
cgcaacgcctcctccgccgcttgcctgatcctgaacacgcacacgctgatcgcggacaag
cccgacatgtccgatcccacggccggaccggcgctcggcgccggagcggagaagcttgga
cgcgaatag
DBGET
integrated database retrieval system
