Skermanella rosea: JL101_020435
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Entry
JL101_020435 CDS
T07666
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroe03032
]
JL101_020435 (ihfB)
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_020435 (ihfB)
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_020435 (ihfB)
DNA replication proteins [BR:
sroe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JL101_020435 (ihfB)
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JL101_020435 (ihfB)
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JL101_020435 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-CCDC81_bac_2
HU-DNA_bdg
TPPII
Motif
Other DBs
NCBI-ProteinID:
UEM02351
LinkDB
All DBs
Position
complement(4362269..4362550)
Genome browser
AA seq
93 aa
AA seq
DB search
MTKSELILRLSEQNPHLYQRDIEKIVTTIFDEISEALARGDRVELRGFGAFSVKKRDARV
GRNPRTGASVHVTQKFIPFFKTGKQLRERLNTE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaactgattcttcgtctgtccgaacagaatccgcacctgtaccagcgc
gacatcgagaagatcgttaccaccatcttcgacgagatatcggaggcgctggcgcgcggc
gaccgggtggagctgcgcgggttcggcgcgttctcggtgaagaagcgcgacgcccgggtc
gggcgcaatccgcgcaccggcgccagcgtccacgtgacgcagaagtttattcccttcttc
aagaccggcaagcagttgcgcgaacgtctgaacacggagtaa
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