Skermanella rosea: JL101_022035
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Entry
JL101_022035 CDS
T07666
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sroe03000
]
JL101_022035
Transcription factors [BR:
sroe03000
]
Prokaryotic type
Helix-turn-helix
IclR family
JL101_022035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HemN_C
B-block_TFIIIC
Fe_dep_repress
HTH_Crp_2
HTH_36
MarR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UEM02636
LinkDB
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Position
complement(4688233..4689048)
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AA seq
271 aa
AA seq
DB search
MDGDHGQQGTRAEAAGPVQALSRSLDLLECIAAAGDGVGSAELAALTGQPPSTAHRLLKN
LEQRGYVAFDEDRGRWFIGVQAFTVGGAFLRRRNHAVIARPVMRRLMEDSGETVNLAVED
KGEAVILTQVECREMMRALSQPGTRAPLYCSGVGKALLAALPEEEALAVLKGLPLKRITG
RTLTGPDDLARDLAETRRRGYAVDDEEHSVGLRCVAAAVHDEHGRPLCALSISGPAVRIP
DGRIAELGVLVVGAAGEITRALGGVAPQRRG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttggacggggatcacgggcaacaggggaccagggcggaggcggccggcccggtccaggcg
ctgagccggtcgctcgacctgctggaatgcatcgcggcggccggggacggcgtcggctcg
gccgagctggcggccctgacgggccagccgcccagcaccgcgcaccgcctgctcaagaac
ctggagcagcggggctacgtggcgttcgacgaggaccgggggcgctggttcatcggcgtg
caggccttcaccgtcggcggcgccttcctgcgccggcggaaccatgccgtgatcgcgcgc
ccggtcatgcggcgcctgatggaggactcgggcgagaccgtcaacctcgcggtcgaggac
aagggcgaggcggtcatcctgacccaggtcgaatgccgggagatgatgcgcgccctgtcc
cagccgggcacgcgcgcgccgctctactgctcgggcgtcggcaaggccctgctggcggcc
ctgccggaggaggaggcgctggcggtgttgaaggggctgccgctgaagcggatcaccggg
cggacgctgaccggtccggacgacctcgcgagggacctggcggagacccggaggcgcggc
tacgccgtcgacgacgaggagcactcggtcgggctgcgctgcgtggcggccgcggtccat
gacgagcacggcaggccgctctgcgccctgtcgatctccggccccgccgtccggatcccc
gacgggcggatcgccgaactgggagtgctggtcgtcggcgccgccggggagatcacccgg
gcgctgggcggcgtggccccgcagcggcggggctga
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