Skermanella rosea: JL101_022270
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Entry
JL101_022270 CDS
T07666
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_022270
Transporters [BR:
sroe02000
]
Other transporters
Pores ion channels [TC:
1
]
JL101_022270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF2171
Motif
Other DBs
NCBI-ProteinID:
UEM02678
LinkDB
All DBs
Position
complement(4738701..4741028)
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AA seq
775 aa
AA seq
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MMIDRIFGRSVLGLLTVLPLLALLLCGTPASAQVPSAALPGAAPAAPAAEPEDPTKQIQD
LLATLEDPAARERLTAQLRTLLQTQRQTEQEEIEPPSTRVLEFLSERVGRLSRQMIAIGA
VFADLPDTVEWLRGQATDEMRRDRWIQVGLQLVLAVGVGFLASAAMSRLLRRARLSIEKR
RSERILARLPLVVLRTVIELLPIGVFAVAGYGTLSVTDPPLIVRLVALIVINATILIQLI
LALTRGVLEPTAPNLRMLPIGDESAHYGYIWVRRLAYTAVYGYFISEAAYMLGLPGGSYE
ALLKLVGLVVTGMLVILILQNRRDVAEWLRGRPLGGGGNGAVEAQEIAAGSRSGAFRAAR
RRLADIWHILAILYLVVIYGIWALSVQDGFEFMLRATGLSILVLIAARIVVNLTDALIRR
GFSISPEVKLQFPHLEERANRYLPILQRVIKAVVWFFALLALLNAWGVDSFAWLESPIGQ
RISSAAVSIGVVLILAAITWEVTSNLIEHYLTGTDRYGTRIERSARVRTLLPLLRNAVMV
VLITVVALVTLSEIGVNIAPLLAGAGVIGLAIGFGSQTLVKDVITGLFILFEDTISVGDV
VDVGGGHSGLVEAITIRTIKLRDQAGGVHSIPFSQVNSVLNLTKDFSYYVMDIGIGYGED
TDRVIGVIKDLGAELQATPQFGRLILEPIEILGVDAFRDNAVIIKARIKTRPIQQWTVGR
EFNRRMKRRFDELGIEIPFPQRTIHIRSDGQASPAAELPSPAGSPPQALRAGRGG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgaccgtatcttcggccggtcggtgctcggccttctgacggtcctgcccctg
ctggccctgctgctgtgcggcacgcccgcctccgcccaggttccctccgcggcactgccg
ggagcggcacccgcggcacccgccgccgagccggaggaccccaccaagcagatccaggat
ctgctggccaccctggaggaccccgccgcccgcgaacggctcaccgcccagctccgcacc
ctgctgcagacgcagcggcagaccgagcaggaggagatcgagccgccgagcacgcgggtg
ctggaattcctgtcggagcgggtcgggcgcctcagccggcagatgatcgccataggggcc
gtcttcgccgacctgccggacacggtggaatggctccgggggcaggccaccgacgagatg
cgccgcgaccgctggatccaggtcgggctccagctcgtcctggcggtcggcgtcgggttc
ctggccagcgccgccatgtcgcgcctgctccgccgcgcccggctgtcgatcgagaaacgg
cggagcgagcgtatcctggcccgcctgccgctggtggtcctgcgcaccgtcatcgaactg
ttgccgatcggcgtgttcgccgtcgccggctacggcacgctgtccgtcaccgatccgccg
ctgatcgtgcggctggtagcgctgatcgtgatcaacgcgaccatcctgatccagctcatc
ctggcgctgacccgcggcgtgctggagccgacggccccgaacctgcggatgctcccgatc
ggggacgagtcggcccattacggctatatctgggtgcggcgcctcgcctatactgccgtg
tacggctacttcatctccgaggcggcctatatgctgggcctgcccggcggctcctacgaa
gcgctgctgaagctggtcgggctggtggtcaccggcatgctggtgatcctgatcctgcag
aaccgccgcgacgtcgccgaatggctgcgtgggcgtcccctgggcggcgggggcaacggc
gccgtcgaggcccaggagatcgcggccggcagccgcagcggggccttccgcgcggcccgg
cgccggctggccgacatctggcacatcctggcgatcctgtacctggtggtgatctacggg
atctgggcgctcagcgtccaggacgggttcgagttcatgctgcgggccaccggcctgtcg
atcctggtgctgatcgcggcgcgcatcgtcgtgaacctgaccgacgccctgatccgccgt
ggcttctcgatctcgcccgaggtcaagctgcagttcccgcacctggaggagcgtgcgaac
cgttacctgccgatcctccagcgggtgatcaaggcggtggtctggttcttcgccctgctg
gccctgctcaacgcctggggcgtcgacagcttcgcctggctggagtcgccgatcgggcag
cgcatcagctcggccgccgtctcgatcggggtcgtcctgatcctcgccgcgatcacctgg
gaggtcaccagcaacctgatcgagcactacctgaccggaaccgaccgctacggcacccgg
atcgaacgcagcgcccgggtccgcaccctgctgccgttgctccgcaacgccgtcatggtg
gtcctgatcaccgtggtcgccctggtcaccctgtcggagatcggcgtcaacatagcgccc
ttgctggccggtgccggcgtcatcggcctggcgatcggcttcggttcccagacgctggtc
aaggacgtgatcaccggcctgttcatcctgttcgaggataccatctcggtcggcgacgtg
gtggacgtgggaggcggccacagcggcctggtcgaggcgatcacgatccgcacgatcaag
ctgcgcgaccaggccggcggcgtccactcgatcccgttcagccaggtcaactcggtgctt
aacctgaccaaggacttctcctactatgtcatggacatcggcatcggctacggcgaggac
acggaccgggtgatcggcgtgatcaaggacctgggcgccgaactgcaggcgacgccgcag
ttcggccggctgatcctggagccgatcgagatcctgggcgtggacgccttccgcgacaat
gccgtcatcatcaaggcccggatcaagacccgcccgatccagcaatggacggtcgggcgc
gagttcaaccgccgcatgaagcgccggttcgacgagctgggcatcgagatcccgttcccg
cagcggacgatccatatccggagcgacggccaggcatccccggcggcggagctgccctct
ccggccggatctccgccgcaggcgctccgggccgggcggggcggttga
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