Skermanella rosea: JL101_024015
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Entry
JL101_024015 CDS
T07666
Name
(GenBank) PAS domain S-box protein
Organism
sroe
Skermanella rosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7TMR-DISMED2
7TMR-DISM_7TM
HATPase_c
PAS_9
Response_reg
PAS_3
PAS_4
PAS
HisKA
PAS_8
PAS_7
PAS_11
Motif
Other DBs
NCBI-ProteinID:
UEM03004
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Position
5134718..5137882
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AA seq
1054 aa
AA seq
DB search
MPQRAAFPVGSTVPRAAAALAAALMVCVCLLAASAGSAQAQNAARTVMLVNEMDVYALGR
DMELFEDPTGRLTIDRVATPEFSHRFQPGRADEPNFGLTRSAVWARVTLNSILAVHRDWF
LVFREALVDRVTVYVPRPDGGWTALEGGMLASRSYFRLAHRYPVFPLWLQPAEQPTLYVR
VENRGTLTIPLVIQSVASLYTSDRSEQLLFGTLFGILMTVCVYLFFIWRVMRERCQLYLI
LMQLSVTFYIASANGFLAEYLWRGMPWWTGYSVPLSILLAMITGILFADSFLAVRRHMPA
FYRVLRLLVLTLASLAVLAAFDRLLVNRLLPWCVIGMVAVFLHAGLGAIRLKVDGGPVFL
VAFSALLGGGLARSLVSLDLLPANLLTSNMFDAGAAVSSVVFAVGIAGQFKTRQEEKERA
LRLSNERFALAADGASAGLYDWDLVTGTVYYSPRMAELYGGPAADLGTSAEAWTRQIHPA
DATRVRRAYRAFLKSRSNTVALEYRLLSRDGRMRWVSTTGAAVRDPRTNWVLRVAGSTAD
ITENKRAEESLRASESLKAAVIASSLDCIITSDAEGRIIEFNPAAEQTFGHDRDSVLGRP
LGDIIMPVLQRARHTAGMRHYFDTRERHLLGRRVEVEAMRSDGTVFPVELAVNEVKAGGQ
AVFTAFVRDITERRRAQAQIASQREALLQSEKLAALGSLLAGVAHELNNPLSVVVGQSVL
LEETAPDDPTAQRARKIHRAADRCARIVKTFLSLARRSPPERQEVDLNEIVLAAVELVGY
SLRTDGIELALALSPAPARLWGDADQLNQVVTNLVVNARQALQGAPGPRRLEVSVVRVPG
PPVIRLTVADNGPGVPAGIRTRIFDPFFTTKPAGIGTGVGLSMCHNIIDSHGGTIALGET
PGGGATFAVELPARDPAPAPAPEPPQAPADVRPLNLLIVDDDPEIALTLAEMLQPDGHCI
SVAQNGAEALERLASDPCDLVISDVRMPGLDGPGLYRELEARHPHLLGRIVFVTGDTLSD
AVRDFLGRTGVPVLEKPYEPADLKAMVARLVGEP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacgagcggccttccccgtcggttcgacggtcccgcgggccgccgcagccctg
gctgcggcgctgatggtctgcgtctgcctgcttgccgcctcggccggttccgcccaggcg
cagaacgccgcccggacggtcatgctggtcaacgagatggatgtctacgcgctcggacgc
gacatggagctgttcgaggacccgaccggccgcctgaccatcgaccgggtggctaccccc
gagttctcgcaccgcttccagcccggccgggcggacgagccgaatttcggcctgacccgg
tccgccgtctgggcgagagtcaccctgaacagcatcctggcggtccaccgggactggttc
ctggtgttccgcgaggccctggtcgaccgggtcacggtctatgtgccccggccggacggc
ggctggacggcgctggagggcggcatgctggcatcgcggagctatttccggctggcccac
cgctatcccgtcttccccctctggctccagccggccgagcagccgaccctctatgtccgg
gtggagaaccgcggcacgctgacgatcccgctggtcatccagtccgtggcgtcgctctac
acctccgaccggtccgagcagctcctgttcgggaccctgttcggcatcctgatgacggtc
tgcgtctacctgttcttcatctggcgggtcatgcgcgagcgctgccagctctacctgatc
ctgatgcagctgtcggtcaccttctacatcgcctcggcgaacggcttcctggccgagtac
ctgtggcgcggcatgccgtggtggaccggctattcggtgccgctgtcgatcctgctggcc
atgatcaccggcatcctgttcgccgacagcttcctggcggtccggagacacatgccggcc
ttctaccgcgtgctccgcctgctggtcctgacgctggcgtccctggccgtgctggcggcc
ttcgaccgcctgctcgtcaacaggctgctgccgtggtgcgtgatcggcatggtcgcggtg
ttcctccatgccgggctcggcgccatccgcctcaaggtggacggcgggccggtcttcctg
gtcgccttctccgccctgctgggcggcggcttggcgcgcagcctggtcagcctcgacctg
ctgccggccaacctgctcacgtccaacatgttcgatgccggggccgcggtctcctccgtg
gtcttcgcggtcggcatcgcgggtcagttcaaaacccggcaggaggagaaggagcgcgcg
ctccgcctcagcaacgagcggttcgccctggccgccgacggcgccagcgccggcctgtac
gactgggacctggtcaccggcaccgtttattactcgccccgcatggcggagctctacggc
ggcccggccgccgacctgggcacctcggccgaggcctggacgcggcagatccatcccgcc
gacgcgacgcgggtgcgccgcgcctaccgcgccttcctgaagagccggtcgaacacggtg
gccctggaataccgcctgctgtcgcgggacggcaggatgcgctgggtctcgaccacgggg
gccgcggtgcgcgatccgcgcaccaactgggtgctccgggtcgccggctcgaccgctgac
atcacggagaacaagcgggcggaggagagcctgcgggcgtcggaatcgctgaaggccgcg
gtcatcgcctcctccctcgactgcatcatcaccagcgacgccgagggccggatcatcgaa
ttcaacccggcggccgagcagaccttcggccatgaccgggactccgtgctgggcaggccg
ctgggcgacatcatcatgccggtgctccagcgcgcccgccacaccgccggcatgcggcac
tatttcgacacccgcgagcgccacctgctcggccgccgggtcgaggtcgaggcgatgcgc
tccgacggcaccgtgttcccggtggaactggcggtcaacgaggtcaaggccggcgggcag
gcggtcttcaccgccttcgtccgcgacatcaccgaacgccggcgcgcccaggcccagatc
gccagccagcgcgaggcgctcctccagtcggagaagctggcagcattgggctcgctgctg
gccggcgtggcgcacgagctgaacaacccgctgtcggtggtggtcggccagtccgtcctg
ctggaggaaaccgcgccggacgacccgacggcccagcgcgcccgcaagatccaccgcgcc
gccgatcgctgcgcccgcatcgtcaagaccttcctgtccctggcccggcgcagcccgccg
gagcggcaggaggtcgacctgaacgagatcgtgctggccgcggtcgagctggtcggatac
tcgctgcgcaccgacgggatcgagctggcccttgccttgtcgcccgcgccggcccggctg
tggggcgatgccgaccaattgaaccaggtggtcaccaacctggtggtcaacgcgcggcag
gcgctccagggggctcccggaccgcggcggctggaggtctcggtcgtccgcgtccccgga
ccgccggtgatccgcctgaccgtggccgacaacggtcccggcgtgccggccggcatccgg
acccggatcttcgaccccttcttcacgaccaagccggccgggatcggcaccggggtgggg
ctgtccatgtgccacaacatcatcgacagccacggcggcaccatcgccctcggcgagacg
cccggcggcggcgccaccttcgccgtcgagttgccggcgcgcgatccggccccggccccc
gcgcccgagccgccgcaggccccggcggacgtccggcccctgaacctgctgatcgtcgac
gacgatcccgagatcgccctgaccctcgccgagatgctccagcccgacggccactgcatc
tccgtcgcccagaacggcgcggaggcgctggaacgcctcgcctcggatccctgcgacctg
gtgatcagcgacgtccgcatgcccggactggacggtcccggcctctaccgcgagctggag
gcccgccatccccacctgctggggcgcatcgtcttcgttaccggcgacacgctgagcgac
gccgtgcgggacttcctgggcaggaccggcgtgcccgttctcgaaaagccctacgagccg
gcggacctgaaggcgatggtcgcccggctggtcggcgagccgtga
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