Skermanella rosea: JL101_024240
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Entry
JL101_024240 CDS
T07666
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroe03021
]
JL101_024240 (rpoH)
Transcription machinery [BR:
sroe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL101_024240 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UEM03047
LinkDB
All DBs
Position
complement(5177131..5178030)
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AA seq
299 aa
AA seq
DB search
MTLLNIAQAGGGMGRYLDEAKRFPMLNPEQERDLAIAWRERGDEEALRLLTGSHLRLVIK
IARGFAGYGLPASELIAEGNVGLMQAAQKFDPDRGFRFATYAIWWIRAAIQEYILHNWSM
VKMGTTAAQKKLFFNLRRLKGRMEELEQGDLSPATVTTIATELDVPESEVIEMNRRLSMG
DSSLNAAVGAEGDTDWLDLLSDERPTQESVVAEADELALRRRLLGQALEKLNDRERQILM
ERRLADEPATLEVLGERYAVSRERIRQIEARAFEKLQKAVLNAAQALRKPAGQPMLAAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacactgttgaatatcgcgcaggccggcggcggcatgggccgctacctggacgaagcg
aaacgctttcccatgctgaatcccgaacaggagcgggacctggcgatcgcctggcgcgag
cgcggcgacgaggaggccctgcgcctgctgacgggcagccacctgcggctggtgatcaag
atcgctcgcggcttcgcgggatacggcctgcccgcgtccgagctgatcgccgagggcaac
gtgggcctgatgcaggcggcccagaagttcgacccggaccgcggcttccggttcgccacc
tatgcgatctggtggatccgcgcggcgatccaggaatacatcctgcacaactggtccatg
gtcaagatgggcaccacggccgcccagaagaagcttttcttcaacctgcgccgactgaag
ggccggatggaggagctggagcagggcgacctgtcgccggccacggtgaccaccatcgcg
accgaactggacgtgcccgagtcggaggtgatcgagatgaaccgccggctgtccatgggc
gacagctcgctgaacgcggccgtgggggcggaaggcgacaccgactggctggacctgctg
tcggacgagcggccgacccaggagtcggtggtcgcggaggccgacgagctggccctgcgg
cggcgcctgctgggccaggcgctggagaagctgaacgaccgcgagcggcagatcctgatg
gagcgccggctggcggacgagccggcgacgctcgaggtgctgggcgagcgctacgccgtg
tcgcgcgagcggatccggcaaatcgaggcgcgggcgttcgagaagctccagaaggcggtg
ctcaacgccgcccaggcgctgcgcaagcccgcgggccagccgatgctggccgcgggctga
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