Skermanella rosea: JL101_024290
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Entry
JL101_024290 CDS
T07666
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sroe01002
]
JL101_024290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sroe01011
]
JL101_024290
Peptidases and inhibitors [BR:
sroe01002
]
Cysteine peptidases
Family C82
JL101_024290
Peptidoglycan biosynthesis and degradation proteins [BR:
sroe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JL101_024290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
DUF4436
Motif
Other DBs
NCBI-ProteinID:
UEM03057
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Position
5188089..5189225
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AA seq
378 aa
AA seq
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MIPRLAVLPALVALLLAALPVRAGGFDQGMARWVAALETRLVALEEELPGAPPATRIARG
PVLKPGMIDTRVFELTRRLVELGYLEPGSERDVLDDLVTAAVVTFQAERGLNADGKVGGA
TLAALNLTPAEEVASIRETLSRIAEFGASAPATLVLVNLPAQDLTLVRDGEIILAMDTVV
GSPSRPTPLLTDTITHVVVNPTWTVPPTVLKQDKLPSLRRTGSPGIDHATVWLDGEPVDP
AAVDWTGVSHWRVRIVQSAGDHNALGRFRFNLTNGDHIYLHGTNAPRVFDRDRRAVSSGC
VRLADPEALADDLLRSAGFTPERIASLVSTGETRWLRLAEPMPVRFVYWPAVLRNDRVVV
LPDIYGIVPPPEMVAATN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatcccccgcctcgccgtccttcccgccctggtggcgcttctgctggccgccctgccc
gtgcgggccggcggattcgaccagggcatggcgcgctgggtggcggcactcgaaacccgg
ctggtcgcgctggaggaggaattgcccggcgcgccgcccgccacgcggatcgcccgcggg
ccggtgctgaaaccgggcatgatcgatacccgggtattcgagctgacccgccggctggtc
gagctgggctacctggagcccggctcggagcgtgacgtcctcgacgatctggtgacggcc
gcggtcgtgaccttccaggccgagcgcggcctcaacgcggacgggaaggtcggcggcgcg
accctggccgccctcaacctgactccggcggaggaggtcgcctcgatccgcgagaccctg
tcgcggatcgccgagttcggcgcctcggcacccgccacgctggtgctggtcaacctgccg
gcgcaggacctgacgctggtgcgcgacggggagatcatcctggccatggacacggtggtg
ggcagcccgtcccggccgacgccgctgctgaccgacaccatcacccacgtggtggtcaac
ccgacctggaccgtgccgccgaccgtcctcaagcaggacaagctgcccagcctgcgccgg
accggctcgcccggcatcgaccacgcgaccgtctggctcgacggcgagccggtcgatccc
gccgcggtcgactggaccggcgtgtcccattggcgggtccggatcgtccagtcggcgggc
gaccacaacgcgctgggccgcttccgcttcaacctgaccaacggcgaccacatctacctg
cacggcaccaacgcgccgcgcgtcttcgaccgggaccggcgggcggtcagttccggctgc
gtccggctggccgatccggaggcgctcgccgacgacctgctgcggtccgccggcttcacg
ccggagcggatcgcgtccctggtgagcacgggcgagacccgctggctccggctggccgag
ccgatgccggtccggttcgtctattggccggccgtgctgcgcaacgaccgcgtcgtcgtc
ctgccggacatctacggcatcgttccgcctccggaaatggttgcggcgacgaactga
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