Skermanella rosea: JL101_024350
Help
Entry
JL101_024350 CDS
T07666
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sroe
Skermanella rosea
Pathway
sroe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JL101_024350 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_024350 (xth)
Enzymes [BR:
sroe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JL101_024350 (xth)
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JL101_024350 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UEM03069
LinkDB
All DBs
Position
complement(5201100..5201891)
Genome browser
AA seq
263 aa
AA seq
DB search
MRIATWNINSVRLRLDLLLRLIDEKNPDVICLQETKTVDETFPLAPLAERGYVHARIHGM
KSYNGVAILSRRPLSGGCVQHWCERQDCRHAIAVVDGIEIHSVYIPSGGDVPDPAVNPKF
EHKLRFLDEMTAWWAAERTPDRPMVVVGDFNVAPLEHDVWSHKQMLDVVSHTPAEVERLT
AMQRSVGWVDAVRRFVPDDRKLYTWWSYRAKDWSAADRGRRLDHIWVTEPLAGSLRGHEV
LRDARGWEPKPSDHVPVLIDLDV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaatcgccacctggaacatcaactccgtccggctgcggctggacctcctgctgcgc
ctgatcgacgagaagaaccccgacgtcatctgccttcaggaaaccaagacggtcgacgag
acctttcccctggctcccctggcggagcgcggctacgtccatgcccggatccacggcatg
aagagctacaacggcgtcgcgatcctgtcgcgccggccgctctccggcggctgcgtgcag
cactggtgcgagcgtcaggactgccgccacgccatcgccgtggtcgacgggatcgagatc
cacagcgtctacatcccctcgggcggggacgttcccgatccggcggtcaaccccaagttc
gagcacaagctgcgcttcctggacgagatgacggcgtggtgggcggccgagcggacgccg
gaccggccgatggtcgtggtcggcgacttcaacgtggcaccgttggagcacgacgtctgg
tcgcacaagcagatgctcgacgtcgtctcgcacactccggcggaggtcgagcggctgacc
gcgatgcagcggtcggtcggctgggtggatgctgtgcgccgcttcgtgccggacgaccgg
aagctctacacctggtggagctatcgcgcgaaggactggtcggcggcggaccgcgggcgg
cggctggaccatatctgggtcaccgagccgctggccggcagcctgcgcggccacgaggtc
ctgcgcgatgcgcgcggctgggagccgaagccgtccgaccacgtgccggtgctgatcgac
ctggacgtgtag
DBGET
integrated database retrieval system
