Skermanella rosea: JL101_024795
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Entry
JL101_024795 CDS
T07666
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sroe
Skermanella rosea
Pathway
sroe00260
Glycine, serine and threonine metabolism
sroe00460
Cyanoamino acid metabolism
sroe00630
Glyoxylate and dicarboxylate metabolism
sroe00670
One carbon pool by folate
sroe00680
Methane metabolism
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
sroe01230
Biosynthesis of amino acids
sroe01240
Biosynthesis of cofactors
sroe04981
Folate transport and metabolism
Module
sroe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JL101_024795
09102 Energy metabolism
00680 Methane metabolism
JL101_024795
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JL101_024795
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JL101_024795
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JL101_024795
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JL101_024795
Enzymes [BR:
sroe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JL101_024795
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UEM03153
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Position
complement(5299419..5300732)
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AA seq
437 aa
AA seq
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MSHSIERFFTARLADSDPELSDSLARELHRQQDQIELIASENIVSSAVLEAQGSVLTNKY
AEGYPGRRYYGGCEFVDVAEQIAIDRAKALFGCTYANVQPHSGAQANQAVFMALLQPGDT
ILGMSLAAGGHLTHGASVNQSGKWFNAVQYGVRRDDALIDYDQIRDFAREHRPKLIVAGG
SAYPRVIDFAAFREIADEVGAYLMVDMAHYAGLIAGGVYPNPVPHAHVTTTTTHKTLRGP
RGGMVLSNDTDLGKKINSAVFPGLQGGPLMHVIAAKAVSFGEALRPEFKTYARSVVDNAR
ALASRLVEGGVDIVSGGTDSHIVLVDLRPKGLTGKAAEASLERAGMTCNKNGIPFDPEKP
MVTSGVRLGTPAATTRGFGTAEFTQVGEMITQVLDGLAAAGGSGDNAAVEAKVRERVQAL
CARFPIYSGAPLAAAAE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactccatcgaacggttcttcaccgcccgcctcgccgacagcgatcccgagctg
tcggactcgcttgcccgggaactgcaccggcagcaggaccagatcgagctgatcgcgtcg
gagaacatcgtctcctccgccgtgctggaggcccaggggtccgtcctgaccaacaagtac
gcggagggctatcccggccgccgatactatggcggctgcgagttcgtcgatgtcgccgaa
cagatcgcgatcgaccgggccaaggcgctgttcggctgcacttacgccaacgtccagccg
cactcgggcgcccaggccaaccaggcggtcttcatggcgctgctccagccgggcgacacc
atcctcggcatgtcgctggcggccggaggccatctgacccatggcgcctcggtcaaccag
tccggcaagtggttcaacgccgtgcagtacggcgtccggcgcgacgatgcgctgatcgac
tatgaccagatccgcgacttcgcgcgcgagcacaggccgaagctgatcgtcgccggcggc
tcggcctatccccgggtgatcgacttcgccgcgttccgggagatcgccgacgaggtcggg
gcatacctgatggtggacatggcccactatgccggcctgatcgcgggcggcgtctatccc
aatccggtcccgcacgcccatgtcaccacgacgacgacgcacaagacgctccgcggtccg
cgcggcggcatggtgctgtccaacgacaccgacctgggcaagaagatcaactccgccgtt
ttcccgggattgcagggcggtccgctgatgcatgtgatcgccgcgaaggcggtgtcgttc
ggcgaggcgctgcggccggagttcaagacctatgcccggtcggtcgtggataatgcccgc
gcgctggcttcaaggctggtcgagggcggggtggatatcgtgtcgggcggaaccgacagc
cacatcgtgctggtcgacctgcggcccaagggcctgaccggcaaggccgccgaggcgagc
ctggagcgcgccgggatgacctgcaacaagaacggcatcccgttcgacccggagaagccg
atggtgacctcgggcgtgcgtctcggcaccccggccgccacgacgcggggcttcggcacg
gcggagttcacccaggtcggcgagatgatcacccaggtcctggacgggctggccgccgcc
ggcggttccggcgacaacgcagcggtcgaggccaaggttcgggagcgggtgcaggccttg
tgcgcccgcttcccgatctattcgggagcgcccttggcggccgcggcggagtga
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