Skermanella rosea: JL101_024900
Help
Entry
JL101_024900 CDS
T07666
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sroe
Skermanella rosea
Pathway
sroe03030
DNA replication
sroe03410
Base excision repair
sroe03420
Nucleotide excision repair
sroe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL101_024900 (polA)
03410 Base excision repair
JL101_024900 (polA)
03420 Nucleotide excision repair
JL101_024900 (polA)
03440 Homologous recombination
JL101_024900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroe03032
]
JL101_024900 (polA)
03400 DNA repair and recombination proteins [BR:
sroe03400
]
JL101_024900 (polA)
Enzymes [BR:
sroe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL101_024900 (polA)
DNA replication proteins [BR:
sroe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL101_024900 (polA)
DNA repair and recombination proteins [BR:
sroe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL101_024900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL101_024900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
TraI_hel_assoc_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UEM06700
LinkDB
All DBs
Position
5321786..5324650
Genome browser
AA seq
954 aa
AA seq
DB search
MTDTAQTDSVQTETAAKPADGLYLVDGSGFIFRAYHAIPPLTRADGTPVNAVMGFTNMLM
KLLADHHAEAVAVVFDSKRLNFRNEFYADYKAHRPEPPEELKPQFGIIREAVEAFCVPSI
ELEGYEADDLIATYARLAREQGRQVTIVSSDKDLMQLVSDGVAMLDPMKNKPIGPEEVFE
KFGVTPDKVVDVQALAGDPVDNVPGVPGIGVKTAAQLIGEYGDLEQLLERAGEIKQPKRR
QALIDNAELARISKRLVRLDDQAPVPVPLDDLKVREPDHEKLLGFLRQQGFRSIITRVEN
EIRADGKLVDGASAPAGPAGTVAAPASAPEAKPRAQFGGKGTYELVQTAEALDRWIAAAH
AAGTVAVDTETDSLSACSTRLVGVSMAVEQGAACYIPVGHVGPGGAPAEGSLDLSPSDAP
PQLPIAEVVAKLKPLLEDPTVLKVGHNLKFDIQVFGSHGIRLSPIDDTMLISYVLETGLH
GHGMDELSKLHCDYAPITYDQVTGTGKSRVTFDRVPLDKATEYAAEDADVTLRLHHALKP
RLVQERLTTLYETIERPLVPVIADMEACGILVDRDVLKELSGDLASRLAELETAIHRLAG
HPFNVGSPKQLGDVLFGEMGLQGGKKGKTGAYSTDSATLEPLAEQGHDIVQKVLDWRQFS
KLKSTYTDSLQQQIDAKTGRVHTSFSLAITNTGRLSSNDPNLQNIPIRTEEGRKIRRAFI
AKPGHVLLSVDYSQIELRLVAEMAGIEALKHAFRENIDIHAMTASQVFGVPLDQMTGEIR
RKAKAINFGIIYGISGFGLGRQLGISAGEANAFIKRYLERFSELAAYMEQTKEFCRKNGY
VTTLFGRRCHIQGITERNPARRQFAERQAINAPIQGTAADIIKRAMVRIPPALEAAGLTG
RMLLQVHDELVFEVPEAEAAETSDTVRRVMEGAASLGVPLVAEAGTGHSWADAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgcccagaccgattccgtccagacggaaaccgccgccaaacccgccgat
ggcctctatctggtggatggctccggattcatcttccgcgcctaccacgccattccgccg
ctgacccgcgccgacggcaccccggtcaacgcggtgatgggcttcaccaacatgctgatg
aagctgctggcggaccatcatgccgaggcggtggcggtggtcttcgacagcaagcggctg
aacttccggaacgagttctacgccgattacaaggcccaccggcccgaaccgccggaggag
ctgaagccccagttcggcatcatccgcgaagcggtcgaggccttctgcgtaccgtcgatc
gagctggaggggtacgaggccgacgacctgatcgcgacatacgcgcgcctcgcccgcgag
caggggcggcaggtgacgatcgtctcctccgacaaggacctgatgcagctggtcagcgac
ggcgtcgccatgctggacccgatgaagaacaagccgatcgggccggaagaggtcttcgag
aagttcggcgtgacgccggacaaggtggtggacgtgcaggcgctggccggcgacccggtg
gacaacgtgccgggcgttcccggcatcggcgtcaagaccgcggcccagctgatcggcgag
tacggcgacctggaacagcttctggagcgggccggcgagatcaagcagcccaagcgccgt
caagccctgatcgataatgcggagctggcgcggatctccaagcggctggtccggctggac
gaccaagccccggtgccggtgccgctcgacgacctgaaggtgcgcgagcctgaccacgag
aagctgctgggcttcctgcggcagcagggattccggtcgatcatcacccgggtcgagaac
gagatccgcgccgacggcaagttggtggacggcgcctccgccccggccggcccggcgggg
accgtggcagctccggcctccgcgccggaggcgaagccccgggcgcagttcggcggcaag
ggcacctacgagctggtccagaccgccgaggcgctggaccgctggatcgccgccgcccat
gccgcgggaacggttgcggtcgataccgagaccgactcgctcagtgcctgcagcacccgg
ctggtcggcgtctcgatggcggtggaacagggggcggcctgctatatcccggtcggccat
gtcggcccggggggtgctccggcggaaggatcgctcgacctcagcccgtccgacgcgccg
ccgcaattaccgatcgccgaggtggtggcgaagctgaagccgcttctggaagacccgacc
gtgctgaaggtcgggcataacctgaagttcgatatccaggtgttcggcagccacggcatc
cggctctccccgatcgacgacaccatgctgatcagctacgtgctggagacgggattgcac
ggccatggcatggacgagctgtccaagctccattgcgactatgcgccgatcacctacgac
caggtgaccggcaccggcaagtcgcgggtcaccttcgaccgggtgccgctggacaaggcg
accgagtacgcggcggaggacgccgacgtgacgctccgcctgcatcacgcgctgaaaccc
cggctggtccaggaacggctgaccaccctctacgagacgatcgagcggccgctggtcccc
gtcatcgccgacatggaggcctgcggcatcctggtggaccgcgacgtgctcaaggagctg
tcgggcgacctggcgtccaggctggccgagctggagaccgcgatccaccggctggccggc
catcccttcaacgtcggctcgcccaagcagctgggcgacgtgctgttcggcgagatgggt
ctccagggcggcaagaaaggcaagaccggcgcctattcaaccgacagcgccacgctggag
ccgctggccgagcagggccacgacatcgtgcagaaggtgctggactggcgccagttctcc
aagctgaagagcacctacaccgacagcctgcagcagcagatcgacgccaagaccggccgg
gtccacacctcgttctcgctggcgatcaccaacaccggccggctgtcgtcaaacgatccc
aacctgcagaacatcccgatccgcaccgaggaaggccgcaagatccgccgtgccttcatc
gccaagccgggccatgtgctgctgtcggtcgactattcccagatcgagttgcggctggtc
gccgagatggccgggatcgaggcgctgaagcacgccttccgcgagaacatcgacatccac
gccatgaccgcgtcccaggtgttcggcgtgccgctggaccagatgaccggggagatccgg
cgcaaggccaaggcgatcaatttcggcatcatctacggcatcagcggcttcggcctgggc
cgccagctcggcatctcggcgggagaggccaacgccttcatcaagagatacctggagcgc
ttctccgaactggccgcctacatggagcagacgaaggagttctgccggaagaacggctac
gtcacgaccctgttcggccgccgctgccacatccagggcatcaccgagcggaacccggcg
cgccgccagttcgccgagcggcaggcgatcaacgcgccgatccaggggaccgcggccgac
atcatcaagcgcgccatggtccgcatccccccggcgctggaggcggctggcctgacgggc
cgcatgctgctccaggtccatgacgaactggtgttcgaggtaccggaggccgaggcggcc
gagacctccgataccgtccgccgcgtgatggaaggtgccgcgagcctgggcgtgccgctg
gtcgccgaggccggtacgggacacagctgggccgacgcgcactga
DBGET
integrated database retrieval system
