Skermanella rosea: JL101_025035
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Entry
JL101_025035 CDS
T07666
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JL101_025035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_025035
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
JL101_025035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UEM03198
LinkDB
All DBs
Position
complement(5355692..5356861)
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AA seq
389 aa
AA seq
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MTDSAEKLSSQATQRAARAFTRRTLLKGAAAAGALSAAGPFIVRNARAASGEVKLFAWSG
YISPEMIADFEKKTGIKAVLTEYGTNDELLNQLRASGGAGFDVIMPTVDRVPNYVEYELV
QPLDESKVNFDGCIDSAVKGSAGMGGVIGGKRYLAPSDWGTEAIAFDNTVAKLQYGQASY
GDLWKPEYKGQVTVRGHSSLIGIALWLESQGKLPHPVRQQFTEEAKARANFDAIIKVATE
NKPSVGQFWSNENEAQGAFRTNGCVIGQTWDSSAATLRKENLPIRFIAPKEGALAWMEGF
CITKGAQNLAQAYEWINWYYTPQAGALYSNHTSINTTSKGAEQYLSDFNKQFFADAYPAD
ALDKLWWWPIQEAWYVSIRNEYQDRFLAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcagcggaaaaactgtccagccaggcgacgcagcgtgccgcccgggccttc
acccgccgcaccctgctcaagggcgccgccgcggcgggcgccctgtccgcggccggcccc
ttcatcgtgcgcaatgcccgcgccgcctcgggcgaggtcaagctgttcgcctggtccggt
tatatctcccccgaaatgatcgccgacttcgagaagaagaccggcatcaaggcggtcctg
accgagtacggcaccaacgacgaattgctgaaccagctccgcgcctctggcggggccggg
ttcgacgtgatcatgccgaccgtcgaccgcgtgccgaactatgtggagtacgagctggtc
cagccgctcgacgagtccaaagtcaatttcgatggctgcatcgactcggcggtcaagggt
tccgccggcatgggcggcgtgatcggcggcaagcgctacttggcgcccagcgactggggc
accgaggcgatcgccttcgacaataccgtcgccaagctccagtacggccaggccagctac
ggcgacctgtggaagccggaatacaagggccaggtcaccgtgcgcggccattccagcctg
atcggcatcgcgctgtggctggagtcgcagggcaagctgccccatccggtgcgccagcag
ttcacggaggaggcgaaggcccgcgccaacttcgacgccatcatcaaggtcgcgaccgag
aacaagccgtcggtcggccagttctggtccaacgagaacgaggcccagggcgccttccgc
accaatggctgcgtgatcggccagacctgggacagttcggcggcgacgctccgcaaggag
aacttgccgatccgcttcatcgcgcccaaggaaggggcgctcgcctggatggaaggcttc
tgcatcaccaagggcgcgcagaacctggcgcaggcctacgagtggatcaactggtactat
acgccgcaggccggcgcgctctattccaaccacaccagcatcaacacgacctccaagggc
gcggagcagtatctcagcgacttcaacaagcagttcttcgccgacgcctatccggcagac
gcgctggacaagctgtggtggtggccgatccaggaggcgtggtacgtctccatccgcaac
gagtaccaggaccgcttcctggcggcgtaa
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