Skermanella rosea: JL101_026220
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Entry
JL101_026220 CDS
T07666
Symbol
nirJ
Name
(GenBank) heme d1 biosynthesis radical SAM protein NirJ
KO
K24868
heme d1 biosynthesis protein
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99987 Cofactor metabolism
JL101_026220 (nirJ)
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Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Motif
Other DBs
NCBI-ProteinID:
UEM03418
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Position
5602827..5604035
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AA seq
402 aa
AA seq
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MLRITQCMHEILDPTPVRPKRNPPGPVVIWNLIRRCNLRCKHCYSISTDVDFPGELSTAE
VFKVMDDLKRFRVPVLILSGGEPLLRPDIFEVSRRAKSMGFYVGLSTNGTPIDETNIASI
AEVGYNYVGISLDGIGPTHDRFRRRDGAFDASLRGIRLCLENGIKVGLRFTLTQDNFHEL
PAVLDLMDREGADKFYLSHLNYAGRGNKHRADDAHFGMTRAAMDLLFERAWRSVESGDGK
EFVTGNNDADGVYLMMWAAERFSERLDHLRAKLVQWGGNSSGVNVANIDNLGNVHPDTFW
WHYTLGNVRDRPFSEIWPDLSDPIMAGLKAIPRTIEGRCASCLHFDICGGNTRVRALQLT
GNAWAEDPGCYLTDEEIGVTDSQPRVQLTPYRSRKSHEVAAN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcgaatcacccagtgcatgcacgaaatcctggacccgacgccggttcgcccgaag
cggaacccgcccggcccggttgtgatctggaacctgatccgacgctgcaacctgcgctgc
aagcactgctactcgatctcgacggacgtcgattttccgggcgaactgagcacggccgag
gtcttcaaggtcatggacgacctcaagcgcttccgggtaccggtactgatcctgtccggc
ggcgaacccctgctgcgccccgacatcttcgaggtctcgcgccgcgccaagtccatgggc
ttctatgtcggcctctccaccaacggcacgccgatcgacgagaccaacatcgcgtccata
gccgaggtcggctacaactatgtcggcatcagcctcgacgggatcgggccgacgcacgac
cggttccgccggcgcgacggtgcgttcgacgcctcgctgcgcggcatccgcctgtgcctc
gagaacggcatcaaggtcggcctgcgcttcaccctgacccaggacaacttccatgaactg
cccgccgtgctggatctcatggaccgggagggtgccgacaaattctacctgtcgcacctg
aactacgccggccgcggcaacaagcatcgcgcggatgacgcccatttcgggatgacccgg
gcggccatggacctgctgttcgagagggcctggcgcagcgtcgaaagcggtgacgggaag
gagttcgtcactggcaataacgatgccgacggcgtttatttaatgatgtgggcggccgag
cgcttctccgagcggctggatcacctgcgtgccaaactcgtgcagtggggcgggaactcg
tctggtgtcaacgttgccaacatcgacaatctcggcaacgtccatcccgacaccttttgg
tggcactacactctcggcaatgtccgcgaccggccgttctcggagatctggccggacttg
tccgacccaatcatggcggggctaaaagcaattccgcgcacgatcgaggggcgttgcgct
tcctgccttcatttcgacatttgcggcggcaacacacgggtcagggcgcttcagctcacc
ggcaatgcctgggccgaggatcccggatgctatctgaccgatgaggaaatcggggttacg
gatagccagccccgcgtgcagctgacaccctaccggagcaggaagtcccatgaagtcgcg
gcgaattag
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