Skermanella rosea: JL101_026535
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Entry
JL101_026535 CDS
T07666
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
sroe
Skermanella rosea
Pathway
sroe00010
Glycolysis / Gluconeogenesis
sroe00020
Citrate cycle (TCA cycle)
sroe00620
Pyruvate metabolism
sroe00650
Butanoate metabolism
sroe00720
Other carbon fixation pathways
sroe01100
Metabolic pathways
sroe01110
Biosynthesis of secondary metabolites
sroe01120
Microbial metabolism in diverse environments
sroe01200
Carbon metabolism
sroe01210
2-Oxocarboxylic acid metabolism
Module
sroe_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JL101_026535 (nifJ)
00020 Citrate cycle (TCA cycle)
JL101_026535 (nifJ)
00620 Pyruvate metabolism
JL101_026535 (nifJ)
00650 Butanoate metabolism
JL101_026535 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
JL101_026535 (nifJ)
Enzymes [BR:
sroe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
JL101_026535 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_21
Fer4_10
TPP_enzyme_C
Fer4
Fer4_6
Fer4_16
Fer4_8
Fer4_9
Fer4_2
Fer4_17
Transketolase_C
Fer4_18
Fer4_4
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
UEM03474
LinkDB
All DBs
Position
complement(5666253..5669846)
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AA seq
1197 aa
AA seq
DB search
MPDDGSVAIASSSGEGRTQAGEIIDGNQAAASVAYRASEVIAIYPITPASPMGELADEWA
AKGRPNLWGQVPKVVEMQSEGGAAGAIHGALQAGALATSFTASQGLLLMIPNLYKIAGEL
TPFVLHVAARTLATHALSIFGDHSDVMACRQTGFAMLASSTVQEAQDMALVAHAATLESR
IPFIHFFDGFRTSHELNRVAPLDDDQIRGLLDGEGIDALRRRALSPDHPVIRGTAQNADV
FFQAREACNPFYEACPGIVRGVLDRFAALTGRRYAPFDYDGAPDAERVVVAMGSGARTVR
ETALWLAARGHKVGALTVRLYRPFDTAGFLAALPRTVRAVAVLDRTKEPGSVGEPLFLDV
VAALADAPAESSARPLVIGGRYGLSSKEFTPGMAAAVFEELTRPQPKRRFTVGITDDVSH
SSLAFDPDLDIEPPDTMRAVFFGLGSDGTVGANKNSLKIIAEHTGAHAQGYFVYDSRKAG
ATTVSHLRFGRHPVNAPWLIRKAGFVACHHAPLLERAEVLELAAPGAQVLLNLPGTPEEV
WARLPREVQELAIERSLRLHAIDASRVAREAGLGRRINTIMQTCFFALSEVMPRDEAIAE
IRAAIEKTYGRRSEEMVRRNNAAVDEALAHLVPVPVPARPTGLPRPPAVPGDAPDFVQRV
TALMLAGHGDRLPVSAFPVDGTWPLGTTRYEKRMIATEIPIWNAELCIQCNKCAMVCPHA
AIRVKAAAPADLADAPEGFVALDYRGDEFQGAKYLLQVAPDDCTGCTLCVEVCPAKDKGN
PRRKALEMRPADAVRPAARPLWDYFRQVLEAPRERVPHNVKQVQLFEPLFEFSGACAGCG
ETPYVKLLTQLFGDRAVIANATGCSSIYGGNLPTTPYATNADGRGPAWANSLFEDNAEFG
FGIRVGIDQLADQARALLRGLGPDLPEGLVQGLLAEGPAGEGALKARREAVLELRRHLAG
IAGPAARRLELLADYLAPKSVWIVGGDGWAYDIGYGGLDHVLSSDRDVNVLVLDTEVYSN
TGGQQSKATPLGASAKFAMAGRAVGKKDLGMLAMAYGHVYVAHVAFGAKDAQTVKAFMEA
ESYPGPSLVIAYSPCVAHGYDLCHQLDQQKLAVDSGHWPLFRYDPRRLAAGQPPLQLDSG
PPKARLADFMANETRFGVVRRDDPERFRRLLKAAETENRLRLDLYRHMAGFVEPAAD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgacgggtccgtcgccatcgcgagcagctctggggagggccggacgcaggcc
ggcgagatcatcgacggcaaccaggccgcggcctccgtcgcctaccgggccagcgaggtc
atcgcgatctaccccataacccccgcctcgcccatgggcgaactggcggacgagtgggcg
gccaagggacggcccaacctgtgggggcaggttcccaaggtggtcgagatgcagtcggag
ggcggcgccgccggggcgatccacggcgcgctccaggccggcgcgctggcgaccagcttc
acggcgtcccagggcctgctgctgatgatccccaacctctacaagatcgcgggcgagctg
acgcccttcgtgctccatgtggcggcgcgcaccctggcgacccatgccctgtcgatcttc
ggcgaccattccgacgtgatggcctgccgccagaccggcttcgccatgctggcgtcctcc
accgtgcaggaggcgcaggacatggccctggtcgcccatgccgcgaccctggaatcccgt
atccccttcatccatttcttcgacgggttccgcacctcccacgagctgaaccgggtggcc
ccgctggacgacgaccagatccggggcctgctggacggggaggggatcgacgccctgcgc
cggcgggcgctgagccccgaccaccccgtgatccgcggcaccgcgcagaacgcggatgtc
ttcttccaggcgcgcgaggcctgcaatccgttctacgaagcctgccccggcatcgtccgc
ggcgtcctggaccgcttcgcggcgctgaccggccggcgctacgccccgttcgactatgac
ggcgcgccggacgccgagcgggtcgtggtcgccatggggtcgggcgcccggacggtgcgg
gaaaccgcgctctggctggcggcgcgcggccacaaggtcggcgcgctgaccgtgcggctc
taccggcccttcgacaccgccggcttcctggcggcactgccgaggacggtccgcgcggtc
gcggtgctggaccggaccaaggagccgggctccgtcggcgaacccctgttcctcgacgtg
gtcgcggcgctggccgacgctccggcggagtcctcggcccgtcccctggtgatcggcggg
cgctacgggttgtcgtccaaggagttcacgcccggcatggccgcggcggtgttcgaggaa
ctgaccaggccgcagccgaagcggcgattcaccgtcggcatcaccgacgacgtgagtcat
tcctcgctggcgttcgatcccgatctcgacatcgagccgcccgacaccatgcgggcggtg
ttcttcggcctgggctcggacgggacggtcggcgccaacaagaattcgctgaagatcatc
gcggagcatacgggcgcccatgcccagggctatttcgtctatgacagccgcaaggccggc
gccaccaccgtctcccacctgcgtttcggccgacacccggtcaacgctccctggctgatc
cgcaaggccggcttcgtcgcctgccaccacgctcccctgctggagcgggcggaggtcctg
gaactggccgctccgggcgcccaggtgctgctgaaccttcccggcaccccggaggaggtc
tgggcccggctgccgcgcgaggtccaggaactggcgatcgagcggtccttgcggctccac
gcgatcgacgccagccgggtcgcccgggaggcggggctggggcgccgcatcaacaccatc
atgcagacctgcttcttcgccctgtccgaggtgatgccgcgcgacgaggcgatcgccgag
atccgcgccgcgatcgagaagacctatggccgccgcagcgaggagatggtccggcgcaac
aatgccgccgtggacgaggcgctggcccatctggtgccggtcccggttcccgcccggccc
accggccttccccggccgccggcggttcccggcgacgcgccggacttcgtccaaagggtc
acggcgctgatgctcgccgggcacggcgaccggctgccggtcagcgccttcccggtcgac
gggacctggccgctgggcaccacgcgctacgagaagcgcatgatcgcgaccgagatcccg
atctggaacgccgagctgtgcatccagtgcaacaagtgcgcgatggtctgcccgcacgcc
gcgatccgggtcaaggccgccgcacccgccgacctggcggacgccccggaaggattcgtg
gcgctcgactatcgcggcgacgagttccagggggcgaagtacctgctccaggtggctccc
gacgactgcaccggctgcaccctgtgcgtcgaggtctgcccggccaaggacaagggcaat
ccccggcgcaaggcgctggagatgaggcccgccgacgcggtgcgcccggcggcccggccg
ctctgggactatttccggcaggtgctggaagccccgcgcgagcgggtgccccacaacgtc
aagcaggtgcagctgttcgagccgctgttcgagttctccggcgcctgcgccggctgcggc
gagacgccctatgtcaagctgctgacccagctgttcggtgaccgcgcagtgatcgccaac
gccaccggctgctcgtcgatctatggcggaaacctgccgaccacgccttatgcgaccaat
gccgacggtcgcgggccggcctgggccaattccctgttcgaggacaatgccgagttcggc
ttcggcatccgggtcgggatcgaccagctggccgatcaggccagggctctgctgcgcggg
ctggggcctgaccttcccgaagggctcgtgcagggcctgctggcggaagggcctgccggg
gaaggcgcgctcaaggcccggcgggaggccgtcctggaactgcgccggcatctggccggg
atcgccggccccgccgcccggcggctggagcttctggccgattatctcgcgcccaagtcg
gtctggatcgtcggcggcgacggctgggcctacgacatcggctatggcggcctggaccat
gtcctgtcctcggaccgggacgtgaacgtgctggtgctggacacggaggtctattcgaat
accggcggccagcagtccaaggcgacgccgctcggcgcctcggccaagttcgccatggcc
ggccgggcggtcggcaagaaggacctgggcatgctggcgatggcttacggccatgtctat
gtcgcccatgtcgcgttcggcgccaaggacgcgcagacggtcaaggccttcatggaggcc
gaatcctatcccggcccgtccctggtcatcgcctacagcccctgcgtcgcccacggctac
gacctgtgccaccagctcgaccagcagaagctggcggtcgacagcggacactggccgctg
ttccgctacgacccgcgccgcttggcggccgggcaaccgccgcttcagctggacagcggc
ccgcccaaggctcggctggccgacttcatggccaacgagacccgcttcggcgtcgtccgg
cgtgacgaccccgagcggttccggcggctgctcaaggctgcggagaccgagaacaggctg
cgcctggacctttaccgccacatggcggggttcgtcgagccggcggccgactga
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