Skermanella rosea: JL101_030915
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Entry
JL101_030915 CDS
T07666
Name
(GenBank) PAS domain-containing protein
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
sroe
Skermanella rosea
Pathway
sroe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL101_030915
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sroe01001
]
JL101_030915
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sroe02022
]
JL101_030915
Enzymes [BR:
sroe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JL101_030915
Protein kinases [BR:
sroe01001
]
Histidine kinases
Other
JL101_030915
Two-component system [BR:
sroe02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
JL101_030915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_4
HisKA
PAS
PAS_7
PAS_9
HATPase_c_2
PAS_2
DnaB_bind
HATPase_c_3
PAS_6
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
UEM06897
LinkDB
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Position
pSR-1:496872..498452
Genome browser
AA seq
526 aa
AA seq
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MPGPDAPGIVAALAPDLAGNVVLRPVGALPMTVRPGGSFPILALGTVRYPLLVVDRDGRV
EAASRAAGDLLDVPAEAVQGLYLREIDGPAALLHDAVASATGSGRPAELEIRARGRRFDI
VVEPLRADAGAVSGAVIHASETPGVSPDGDMLSLVLDQLPCAVYWKDSRSRYLGGNRLFA
EVVGLGSSRAVPGITDDDIMASVDAETVRREDEQVMRTGESLVSIEQELALAVGGRSIEK
LKVPLRGADGGIIGILCIAQDVTQRKRAEEKLITDKLAAEQASRAKTSFLAAASHDLRQP
IQALALFAKLLEKRVSEPASRNLVGLIQQSARSLSDLLEAVIHLSKLEAGEVEPNIGPTL
VGELIGRLVGEFSHQAVGKGLDFRAVNTDMEVQSDPLLLERILRNLISNAIRYTERGRVL
VGCRRRGDRVSIEVWDTGIGIPKDQFGEIFREFHRSRNKNHKAVDGFGIGLAVVDRLTNL
LGHSIEVSSIPGKGSVFRIQAEAAPSCLFHKSPVEVLPIQGKHTDA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggcccggacgctcccggcatcgtggccgcgctcgccccggacctcgccgggaat
gtggttctccgtccggtgggggcgttgccgatgacggtccggccaggagggagcttcccg
atcctcgccctgggtacggtcaggtatcccctgctggtggtcgaccgcgacggccgggtg
gaggcggcgagccgcgccgcgggcgatctgctcgatgtgccggcggaggccgttcagggg
ctgtacctccgcgagatcgacggaccggccgcgctcctgcacgacgccgtggcgtccgcg
accgggtcggggcggccggccgagctggagatccgggcacggggccggcgtttcgacatc
gtggtagaacccttgcgcgcggacgccggcgccgtttccggggccgtgatccacgccagc
gagactcccggcgtttccccggacggcgacatgctgtccctggtgctcgaccagctgccc
tgcgccgtctactggaaggacagccgttccaggtatctcggcggcaaccggctgttcgcc
gaagtcgtcggcctcggttcgtcacgcgccgttcccggcatcaccgacgacgacatcatg
gcgtccgtggacgcggagaccgtccgccgggaagacgagcaggtgatgcggaccggcgag
agcctcgtcagcatcgagcaggagctcgcgctggccgtgggcggcaggagcatcgagaag
ctcaaggtgccgctccgcggcgcggacggcgggatcatcggcatcctgtgcatcgcccag
gacgtcacccagcggaaaagggccgaggagaagctgatcaccgacaagctcgccgccgag
caggcgagccgggcgaagacgagcttcctcgccgccgcgagccatgacctgcgccagccg
atccaggcgctcgccctgttcgccaagctgctggaaaaacgggtcagcgaaccggcatcc
aggaatctcgtcgggctgatccagcaatcggcgaggtcgctctccgaccttctggaggcg
gtcatccacctgtcgaagctggaggcgggggaggtcgaacccaacatcggcccgaccctg
gtgggcgagctgatcggccggctggtcggggagttcagccaccaggcggtcgggaagggc
ctggatttccgcgccgtcaacacggacatggaggtgcagagcgatccgcttctgctggaa
aggatcctccgcaacctgatctccaacgccatccgctacacggaacgcgggcgcgtcctg
gtcgggtgccggcgccggggcgacagggtcagcatcgaggtctgggacaccggaatcggc
atccccaaggaccagttcggcgagatcttccgcgagttccaccgcagccggaacaagaat
cacaaggcggtggacggcttcggcatcggcctggcggtcgtggaccggctgaccaacctg
ctggggcacagcatcgaggtctcgtcgatcccgggaaaggggtcggtcttccggatccag
gccgaagcggcaccgtcgtgcctttttcataaaagccctgttgaggtcttgccaattcag
gggaaacacaccgatgcgtaa
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