Skermanella rosea: JL101_031395
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Entry
JL101_031395 CDS
T07666
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_031395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_031395
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL101_031395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UEM07442
LinkDB
All DBs
Position
pSR-2:1198..2823
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AA seq
541 aa
AA seq
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MSNRLAYLRRLTASGAVAAALLAPAALVATAAGPALAQEQVQKGGTLNVIVQPEPPILVL
GLNQQGPTQTVAGKIYEGLLRYDHDLNPMPSLAESWEVSPDGLTYTFKLRRNAKWHDGTP
FTAKDVVFTTAKFLPEVHPRARANFSHVESVEAPDDYTVTFKLKQPFPAFMKAFEVSSAP
MMPAHIYEGTDYKQNPKNSTPIGTGPFKFEQWVKGSHIHLVRNADYYLDGRPYLDGIYFR
VIPDAASRALALESGQVDISQYNDVEPFDVPRLKELPHLTMTTKGYEFVAPLSWIEINTR
TAPLDDKRFRQALAHGLNREFIRDRIWFGLGRVATGPVNSVTPFHEPDVPEYEYDTDKAE
ELLDEMGLEPNGSGVRAEITLTPMPYGETWARLGEYIKQSWGKIGVKVNLESTDVAGWVQ
KVSNWDYQTTNNFVYQYGDPSLGVARTYISDNIRKGVMFSNTMGYSNPKVDELFAKAAVE
NDPKQRGAQLSEAQKILVGDMPVIWLLEMEFPTFVNKRVHNAVTTAIGTSENFADTWVEK
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccgactggcgtatctgcgccgcctcaccgcctcgggggccgtcgcggcggcc
ctcctcgctcccgcggcactggtcgcgaccgccgcggggccggccctggcccaggaacag
gtgcagaagggcgggacgctgaacgtcatcgtccagcccgagcccccgatcctggtcctc
ggcctgaaccagcagggaccgacccagacggtcgccggcaagatctacgagggcctgctg
cgctatgaccacgacctgaaccccatgccgtcgctggcggagagctgggaggtttccccc
gatggcctgacctacaccttcaagctgcgccggaacgcgaagtggcacgacggaacgccg
ttcacggccaaggacgtggtgttcaccaccgccaagttcctgcccgaggtccatccccgc
gcccgcgccaacttcagccatgtcgagagcgtcgaggcgcccgacgactacaccgtcacc
ttcaagctgaagcagccgtttccggccttcatgaaggccttcgaggtgtcctcggccccg
atgatgccggcccatatctacgaaggcaccgattacaagcagaacccgaaaaactcgacc
ccgatcggcaccgggccgttcaagttcgagcaatgggtcaagggcagccacatccacctg
gtcaggaacgcggactattacctcgacggccggccctacctggacgggatctatttccgg
gtcatccccgacgccgccagccgcgccctggccctggagagcggccaggtcgacatcagc
cagtacaacgacgtcgagccgttcgacgtgccgcgcctgaaggagctgccgcacctcacc
atgaccaccaagggctacgagttcgtcgccccgctgtcctggatcgagatcaacacccgc
accgcgccgctggacgacaagcgcttccggcaggccctggcccacgggctgaaccgcgag
ttcatccgcgaccggatctggttcggcctggggcgcgtcgcgaccggcccggtcaattcg
gtgacccctttccatgaaccggacgtccccgaatacgagtacgataccgacaaggccgag
gaactgctggacgagatgggcctggagcccaacggcagcggcgtgcgggccgagatcacc
ctgacccccatgccctatggcgagacctgggcgcgcctgggcgagtacatcaagcagtcc
tggggcaagatcggcgtcaaggtgaacctggagagcaccgacgtcgccggctgggtccag
aaggtttccaactgggactaccagacgaccaacaacttcgtctaccagtacggcgatccg
tccctgggcgtggcgcggacctatatctccgacaatatccgcaagggcgtgatgttctcc
aacaccatgggctattccaatcccaaggtcgacgagctgttcgccaaggccgcggtggag
aacgaccccaagcagcgcggcgcgcagctgagcgaggcccagaagatcctggtcggcgac
atgccggtgatctggctgctggagatggagttcccgaccttcgtcaacaagcgggtccac
aacgcggtgaccacggcgatcggcacgtccgagaacttcgccgacacgtgggtcgagaag
aagtaa
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