Skermanella rosea: JL101_032020
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Entry
JL101_032020 CDS
T07666
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sroe
Skermanella rosea
Pathway
sroe00280
Valine, leucine and isoleucine degradation
sroe00650
Butanoate metabolism
sroe00907
Pinene, camphor and geraniol degradation
sroe01100
Metabolic pathways
sroe01120
Microbial metabolism in diverse environments
sroe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
JL101_032020
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JL101_032020
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JL101_032020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JL101_032020
Enzymes [BR:
sroe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
JL101_032020
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UEM07554
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Position
pSR-2:127824..128801
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AA seq
325 aa
AA seq
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MLERTTDDQTIRMEGFPTEVTVIDVGPRDGLQSEAGWIPTEEKIALINGLIDAGIRQLEA
TSFVSPRAVPQMRDAAEVIAGIDRSKGAALTALVPNARGAERAAAAGIDAMVVFLSASES
HNRKNVNRSVAQSLDGFGEVCGVAGEAGIPVYGAIATSFGCPFEGSVPVSRVVDIAKAYR
DLGITRLTLGDTTGMATPPIVKATCRALCRELPDIEVTLHFHNTRGVGLACVYTGLEEGV
TRYEASIGGLGGCPFAPGATGNICTEDLVYMLDECGVRSGVDLARLVEVSRRLERVIGRT
LPGQVMKAGPRLSLYPVDSVATACG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgctagagcgcacgactgacgatcagacgatccgtatggagggctttcccaccgaggtc
acggtgatcgatgtcggcccgcgcgacgggttgcagtccgaggccggatggattccgacg
gaagagaagatcgccctgatcaacggcctgatagacgccgggatccggcagctggaggcg
acatcgttcgtgtcgccgcgggcggttccgcagatgcgcgacgccgccgaggtgatcgcc
ggaatcgaccggtcgaagggcgcggcgctgaccgccctggtgccgaacgcccggggagcc
gaacgcgccgccgccgcggggatcgacgccatggtggtcttcctgtccgcctccgaaagc
cataaccggaagaatgtgaaccgttccgtcgcgcaatccctggacggcttcggcgaggta
tgcggggtcgccggcgaggccggcattcccgtgtacggcgcgatcgcgacgtccttcggc
tgtcccttcgagggctccgttccggtaagccgggtcgtggacatcgccaaggcgtaccgg
gacctcggcatcacccgcctgacgctgggcgacacgacgggcatggcgacaccccccatc
gtcaaggcgacctgccgcgcgctgtgccgggagttgccggacatcgaggtgacgcttcac
ttccacaatacgcgcggcgtcgggctcgcctgcgtctacacggggctcgaggagggggtg
acccgctacgaggcgtcgatcgggggccttggcggctgccccttcgccccaggtgccacc
gggaacatctgcaccgaggacctcgtctacatgctcgacgagtgcggggtccgctccggc
gtcgacctcgcgcgcctggtggaggtctcgcgacggcttgagcgggttatcggccggacg
ctgccgggtcaggtgatgaaggccgggccgcggctatcgctctatcccgtcgactccgtc
gcgacggcttgcggttga
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