KEGG   Skermanella rosea: JL101_032240
Entry
JL101_032240      CDS       T07666                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
sroe  Skermanella rosea
Pathway
sroe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sroe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JL101_032240 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sroe02044]
    JL101_032240 (tssM)
Secretion system [BR:sroe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JL101_032240 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: UEM07589
LinkDB
Position
pSR-2:173866..177477
AA seq 1203 aa
MIDALKLPISLRTGFILCGLAVVSGAAFVIGPLISIGGADPFSSLAGRIGFAALAPGIYG
VTRLVESWRTFRQNAAMLDSAVRPEADAAGGAEYAHESAEIAQRLREALSVLRKRRFPGA
AGKRWLYQIPWYVIIGPPGSGKTTALVNAGLSFPLADRFGRNAMRGIGGTRSCDWWFTDE
AVLIDTAGRYTTQDSDAGKDHAAWLGFLRLLRRYRRRQPLNGLLVAIAVDEVTEGREEAR
LAHARLIRRRIQEVQAELRIRLPVYLLLTKADLISGFTEFFDDLGREGRQSVWGFTFDLD
GDRQEDGKDDRGVAPVDRFGGAFDALVGRLDERLIDRLHQERDGARRNAVYSFPHQVASI
KDALTQFVEEAFRPNSFEQEIMLRGAYFLSGTQVGTPIDRVLAAMRRSFGIGPQPKAAGI
QPKRSYFLTRLLREVVFGEAGLANADPRIERNRRRIAWSLHGAIAVLCVAAAGVAGIGYM
LNRTLIEKVEAAAGDYALKAREMDLDQVGDFDLARVLPLLNEVRDIPTGYAERDLPRSWL
AGLGLDQTEKLGSQTVGAYRRILGSVLLPRLILRLEDQLRKRPDEPEFLHQALKAYLMLG
GQGPMDRAFVERWFEFELRASYPDQQDARLRQDLGGHIKALLERPLPQVGLDGDLVSQLR
AVLKQTSLAKQTLDAIAAGPEAAALPGWTIADHAGPAGTWVFHRASGLPLADGIPGLYTR
DGFFRTFLPLLPHYAETMRQEAWVLGSGPVKMSPEAEAEHERDTVGLYLQAFALRWDRLL
GDVAVNSAKSYDDALRTLSILSSPTSPIRLLVVSAGTETRLAQPAGDAAPPNRQAMADEK
LAKLLLRQRNPDSIAALAERFSAEHFRELHALSMVPPGSSASAQPRIDEVIVSLGNLYRS
LNQARFGGTSSGDARGDGQITPLQDSVDGAAALAEIDAQAASLPAPVRNWITGISRTSSS
MSSDGVRQRLTDAWLGNGGRFCAQATAGRYPFDRTGTDEISLEDFARLFAKGGLIDSFFE
QNLASFVDKSAQPWRWRKLGPVDLKLSRESLAQFERAALIRDSMFPPGSTRPEAGFRLTL
VRTSFGTSGIDVSVGGRTASLAPGSAQSAQLSWPGNDPATGTSVTFKSGLPNSRPTAIVI
DGPWSLFRLLDRSLLQADAATRDRLTVRIASGPAEVDLLLQESSLANPFGANPVSAFRCP
RTL
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgatcgatgccctgaagctgccgatctccctgcggacgggattcattctctgcgggctc
gccgtcgtttccggggcggccttcgtcatcggaccgctgatttctatcggcggcgccgat
cccttctccagccttgccggccggatcggctttgccgcgctggcaccggggatctacggc
gtgacgaggctggtcgagagctggaggacgttccggcagaatgcggccatgctcgattcg
gcggtcaggccggaagccgatgccgccggcggggccgaatacgcccatgagagcgcggag
atcgcccaacgcctgcgggaagccctgtcggtgctcaggaagcgccgttttccgggagcc
gcaggcaaacgctggctgtaccagatcccctggtacgtcatcatcggaccgccgggttcc
ggaaagacgacggcgctggtgaatgccggcctcagcttcccgcttgccgaccggttcggc
aggaatgccatgcgcggcataggcggaacgcgaagctgcgactggtggttcaccgacgaa
gccgtgctgatcgacaccgccggccgctacacgacccaggacagcgatgccggcaaggac
catgccgcgtggcttgggtttctgcgcctgctgaggcgatatcgccgccgtcagcccctg
aacgggctgctggtggcgatcgcggtcgacgaggtgaccgaaggccgggaggaggcgcgt
ctggcgcatgcccggctgatccgccggcgcattcaggaagtccaggccgagttgcggatc
cggctgccggtctacctgctcctgaccaaggcggacctgatctccggctttaccgagttc
ttcgacgatctcggccgagaaggccggcagtccgtctggggctttaccttcgacctggat
ggcgaccggcaggaagatggaaaggacgaccgtggcgtcgcgccggtagaccgcttcggc
ggtgcgttcgacgcgctggtcggccggctggacgaaaggctgatcgaccggctgcatcag
gaacgcgacggcgcccggcgcaatgccgtctacagctttccgcaccaggtcgccagcatc
aaggacgcgctgacccagttcgtcgaggaggcgttccgcccgaactccttcgagcaggag
atcatgctgcgcggtgcctatttcctcagcggcacccaggtcggtacgccgatcgaccgc
gtcctggccgccatgaggaggagtttcgggatcggtcctcagccgaaggcggccggtatc
cagccgaagcgcagctatttcctgacccgcctgctgcgcgaggtggtgttcggcgaagcc
ggattggcgaatgccgatccccggatcgagcgaaatcggcgccgcatcgcctggagcctc
catggcgcgatcgccgtcctgtgcgtcgcggcggccggggtggcggggatcggctacatg
ctcaatcggacgctgatcgagaaggtcgaagccgccgcgggcgactatgccttgaaggcg
cgggagatggacctggaccaggtcggcgatttcgacctcgcccgcgtcctgcccctgctc
aacgaggtgcgcgacatcccgaccggctatgcggaacgagatctcccgcgctcgtggctg
gcgggcctgggcctggaccagaccgaaaagctcggctcgcaaacggtcggcgcctatcgg
cgcatcctcggctccgtgttgctgccgcgcctgatcctgagattggaggaccagctccgc
aagcgccctgacgaaccggagttcctccatcaggccctgaaggcctatctcatgctcggc
ggacaggggccgatggaccgcgcgttcgtcgagcgctggttcgagttcgagctacgggca
tcctaccccgaccagcaggatgcccggctgcgacaggatctcggcggccacatcaaggcc
ctgctcgagcgtccgctgccgcaagtcggcctggacggcgatctggtgagccagctccgc
gccgtcctgaaacagacttcgctcgccaagcagacgctcgacgcgatcgccgccggtccg
gaggccgccgcacttcccggctggacgatagccgatcatgccggcccggccggcacctgg
gtcttccaccgcgccagcggcctgccgctcgccgacggcattcccggtctgtatacccgt
gacggcttcttcaggaccttcctgccgttgctgccccattacgccgaaacgatgcggcag
gaggcgtgggtccttggcagcgggccggtaaagatgagcccggaagccgaggcggagcac
gaacgcgataccgtcggtctttatctccaggcgttcgcgctccgatgggacaggttgctg
ggcgacgtcgccgtcaattccgcgaaatcctatgacgacgcgttgcgcacgctgagcatc
ctgtcttcgccgacctctccgatccgccttctggtcgtctcggccggcacagagaccagg
ctcgcacagccggccggcgacgcggcgcccccgaaccgtcaggcgatggccgacgagaaa
ctcgccaagctcctgcttcggcagcggaaccccgacagcatcgccgcgctggcagagcgc
ttcagcgccgagcatttccgggaactgcacgcgctgagcatggttccgcccggcagttcg
gccagcgcccaacctcggatcgacgaggtgatcgtcagcctcggcaatctctaccgctcg
ctcaaccaagcccgcttcgggggaacaagctccggggacgcacggggcgacggtcagatc
acgccgctgcaagacagcgtcgacggtgcggctgccctggccgagatcgatgcgcaggcc
gccagcctgccggctcccgtgcgtaactggatcaccggcatcagccggaccagttcctcc
atgtcgtcggacggcgttcgtcaacggctcaccgatgcgtggcttggaaacggcggtcgg
ttctgtgcccaggcgacggccggccgctaccctttcgacaggaccggtaccgacgaaatc
tcgctcgaagacttcgcccggctctttgcgaagggcgggctgatcgacagcttcttcgaa
cagaacctggcttccttcgtggacaaatccgcccagccctggcgatggcgcaagctcggc
ccggtcgatttgaagttgtcgcgggagtcccttgcccagttcgagcgggcggcgctgatc
cgcgacagcatgttcccgcccggcagcaccagaccggaggccggcttccgcctgacgctg
gtgcgtaccagtttcgggacgagcgggatcgacgtctccgtcggcggcaggaccgccagc
cttgctccgggaagcgcccagtcggcgcaattgagctggcccgggaacgatcccgccacc
ggtacgagcgtgaccttcaagtccggtcttcccaactcccgtccgaccgcgatcgtcatc
gacggtccctggtcgctgttccgcctgctcgaccggagcctgctccaggccgacgccgcg
acgcgcgatcgtctgacggtccggatcgccagcggtcccgccgaggtcgatctcctcctt
caggaaagcagccttgcaaacccgttcggggctaatcccgtcagcgcattccgctgtccc
agaaccctctga

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