KEGG   Skermanella rosea: JL101_032260
Entry
JL101_032260      CDS       T07666                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
sroe  Skermanella rosea
Pathway
sroe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sroe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JL101_032260 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sroe02044]
    JL101_032260 (tssH)
Secretion system [BR:sroe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JL101_032260 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 AAA_5 AAA_22 ClpB_D2-small Sigma54_activat TniB AAA_14 nSTAND3 Clp_N AAA_7 AAA_25 Zeta_toxin ATPase_2 NBD_SMAX1 IstB_IS21 ResIII AAA_30 nSTAND1 NACHT AAA_18 AAA_24 SRP54 Tma16 CbiA TIP49 HerA_C T2SSE Hpr_kinase_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: UEM07593
LinkDB
Position
pSR-2:180670..183279
AA seq 869 aa
MTIITRDTVFDRLGEFSMKTLQGAFEFATLRGDTYIEPVHWLDRWLRAEDSDASLILERL
QVPRDALQKDIEAALSSMVRERSSRLDFSRELELLMERGWIGASLLFGQSRIRTGHLLHG
MIEDTRLRRLACDISPLFKRVEAAVIAERFGDLTRGSSEEGIDPSGDSTPVATAHLAGHE
TALGRYVTDLTAEAEAGRIDPATGREREVRLIVDILMRRRQNNPIVVGEAGVGKTAVVEA
LAARIAKGDVPPAMRDVRLMSLDLAALQAGASAKGEFENRLKQVIAEIAGSAKPIVLFID
EAHSLIGAGGAAGTGDAANLLKPALARGTLRTIAATTWAEYKKHIEKDPALSRRFQVVQV
DEPDEERAVAMLRGMVPVFAEHHGIAVLDEAVVAAVRFSHRYIQGRQLPDKAVSVLDTAC
ARVALSRNAVPAGIEDLMRRIERLDTELTALAAERRVGRLDEAREDLLSGRLTAERSALA
GLQARHAEESALVSEIIALEARLRDRESRDELDKLRGLRVDLAALQGGRPLVLPAVDEQA
VATVIESWTGIPVGRMLSDEIDAVLTLADTVKRRVIGQDHALDAIARRIETARAGLDDPS
KPKGVFLLVGPSGVGKTETALALAESLFGSDDNVVAINMSEFQEAHTVSTLKGSPPGYVG
YGEGGRLTEAVRRKPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGRRIDFRNTIIL
LTSNAGSDLILRLCKDSMRLPAPDDVSRSLRDPLLEVFPAALLGRLSVVPYYPLTDAMLD
RIIGLRLDSVQNRIEASWNVPFTYAETLVSHIRARCYEVESGGRMIDAIMTGTLLPDISR
EVLRRLRDRQPLTGIHVDVDQGELRYEFT
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgacgatcattacccgcgacaccgtattcgaccggctcggcgagttctcgatgaaaacc
ctccagggcgccttcgagtttgcgaccttgcgcggcgatacttacatcgaaccggtccat
tggctcgatcgctggctgcgtgccgaggacagcgatgcctcgctgatcctcgagcggctt
caggttccgcgcgacgccttgcagaaggacatcgaagccgcgctgtcgagcatggtccgg
gaacgctcctcccgcctcgacttctcccgcgagcttgaactcctcatggagcggggctgg
atcggcgcaagcctgctgttcggccaatccaggatccgcaccgggcacctgctgcatggc
atgatcgaggacacgcgattgcgccggctggcctgcgatatctcaccgcttttcaagcgt
gtcgaggcggcggtcatcgcggagcgcttcggcgacctgacgcggggatcgtccgaggaa
ggcatcgatccttcaggcgattccaccccggtagcgaccgcccatctcgccggtcacgag
acagccttgggccgatacgttaccgacctgaccgcggaagcggaggccgggcggatcgat
ccggcgacgggccgcgaacgcgaggtccggctgatcgtcgatatcctgatgcggcgtcgg
caaaacaatccgatcgtcgtcggagaagccggcgtcggcaagaccgccgtcgtggaagcc
ctggccgcacggatcgccaaaggcgacgtgccgccggccatgcgcgatgtgaggctgatg
tcgctcgatctcgccgctctgcaggcgggagcttcggcgaagggcgagttcgagaaccgc
ctgaaacaggtgatcgccgaaatcgccggatcggcaaaacccatcgtcctgttcatcgac
gaggcgcattccctgatcggcgcgggaggggccgccggaacgggcgacgccgccaacctg
ctcaagccggcattggcgcgggggaccctgcgtacgatcgccgctacgacctgggcggaa
tacaagaagcatatcgaaaaggacccggcgctgtcacgccggttccaggtcgtccaggtc
gacgagccggacgaggagcgcgccgtcgccatgctgcgcgggatggtaccggtctttgcc
gaacatcacgggatcgccgttctggacgaggcggtcgtggcggcggtccgattctcgcac
cgatatatccagggccgccagctgccggacaaggccgtttcggtgctggacacggcctgt
gcgagagtggcgctgagccggaacgccgtgccggcaggcatcgaagacttgatgcggcgg
atcgagcgtctcgataccgaactgacggccctggcggcggagcggcgcgttggccgcctg
gacgaagcgcgggaggacctgctgtcgggccgattgacggcggaacggtcggcactggcg
gggctccaggcgcgccatgccgaggagtccgccctggtgtcggagatcattgcactggaa
gcccgtctgcgcgatcgggaatcgcgggacgaactcgataagctccgggggctgcgcgtc
gacctcgcggcacttcagggtggtcgtcccctggtgctgcccgcggtcgacgaacaggcg
gtggcaaccgtgatcgaaagctggaccggtatccccgtcgggcggatgctgtccgacgag
atcgacgccgtcctgactttggccgatacggtgaagcgtcgcgtcatcggccaggaccac
gcgctcgacgccatcgcaagacggatcgaaaccgcccgggccggcctggacgacccatcc
aagcccaaaggcgtgttcctgctggtcggtccgtccggcgtcggcaagaccgagaccgcc
ctggcgctcgcggaaagcctgttcggcagtgacgacaacgtcgtcgcgatcaacatgtcg
gagttccaggaggctcacaccgtttcgacgctgaaaggctcgccgccgggctatgtcgga
tatggagagggcgggcgcctgaccgaagcggtgcgccgcaagccctacagcgtcgtcctg
ctcgacgagatcgaaaaggcgcatcccgacgtccacgagatcttcttccaggttttcgac
aagggctggatggaagacggcgaaggccggaggatcgacttccgcaatacgatcatcctg
ctgacgtcgaatgctgggtccgatctcatcttgcggttgtgcaaggattccatgcggctg
ccggcgcccgacgacgtctcccgctcccttcgcgatcccctactggaggttttcccggcg
gcgctgctcggccgcctctcggtcgttccctattatccgctgacggacgcgatgctcgat
cgcatcatcggcctgcgcctggactccgtccagaaccgcatcgaagcaagctggaatgtg
ccgttcacctatgccgagacgctggtcagccatatccgcgcacgctgctacgaggtggaa
agcggaggaaggatgatcgacgccatcatgaccggaacgcttctgccggatatcagccgg
gaggtcctgagacggttgcgggaccggcagccgctgaccggtatccacgtcgacgtggac
cagggagaactgcgctacgagttcacgtga

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