Skermanella rosea: JL101_033090
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Entry
JL101_033090 CDS
T07666
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_033090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_033090
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL101_033090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IDEAL
Motif
Other DBs
NCBI-ProteinID:
UEM07320
LinkDB
All DBs
Position
pSR-2:357069..358580
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AA seq
503 aa
AA seq
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MTPRGVLSVACAMLMASAALPAAAQTGDDAITVVLPEQPGNLEPCGSIMTNVGQILNQNV
TEPLTVIDPENGTPRPKLATSWERVDDTTWRFRLRDGVKFHDGADFDAEAAAFSIRRMTS
GAFTCNNIAKFGSAKLTVTPVDKSTLEIRTGMPEPILPALLSVAMMVSPKTPADRAVNDP
VGTGPYELETFTPQTVVLERFDGYWGETPDIAKATYVWRAESSLRAAMVQTGEAQLTPAI
AIQDATDPETDFSYLNSETTAIRIDTGKAPLDDVRVRKALNLAIDWQGMAELFGDDVLRA
SQMVVPGINGHNAAIEPWSYDPDRAATLLQEARADGVPVDTEIKLIGRNGIYPNGNEALE
AMMTMWEAVGFNIDLTMLDVADWTRYLQKPFSQDRGPTLLQVMHDNNKGDAAFTIPIFYH
SSGQYATFSDPKLDARIDEALDQTDEARTKAFQEILAEVHDGIAVDIPMFHMIGYTRVGP
GLDWRPNLTTNSEIPLAEIRLKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacacccagaggtgtgctgtccgtcgcctgcgccatgctgatggcatcggcggccctg
cccgcggcggcgcagacgggagacgacgccatcacggtcgtcctgccggagcagccgggc
aacctggagccgtgcggcagcatcatgaccaatgtcgggcagatcctgaaccagaacgtc
acggaaccgctgacggtcatcgacccggagaacgggacgccccggcccaagctggcgacg
tcgtgggaacgggtcgacgacacgacctggcgcttccgcctgcgcgacggggtgaagttc
catgacggcgccgacttcgacgccgaggcggcggccttctcgatccggcggatgaccagc
ggggccttcacctgcaacaacatcgccaagttcggcagcgcgaagctgacggtgaccccg
gtggacaagtccaccctggagatccggaccggaatgccggaaccgatcctgcccgccctg
ctgagcgtcgcgatgatggtttcgccgaagacgccggccgaccgggcggtcaacgatccg
gtcggcaccgggccctacgagctggaaaccttcacgccgcagacggtcgtcctggagcgg
ttcgacggctactggggcgagacgcccgacatcgccaaggcgacctatgtctggcgcgcg
gaatcctcgctccgggccgcgatggtccagaccggggaggcccagctgacgcccgcgatc
gccatccaggacgccaccgacccggaaacggacttctcctacctgaattccgagacaacc
gcgatccggatcgacaccggcaaggcgccgctcgacgacgtgcgcgtccgcaaggcgctc
aacctcgcgatcgactggcagggcatggcggagctgttcggcgacgacgtcctgcgcgcc
tcgcagatggtcgtccccgggatcaacggccacaacgccgccatcgagccctggagctac
gatccagaccgggcggcgacgctcctgcaggaggcgcgcgcggacggcgtcccggtcgac
accgagatcaagctgatcggccgaaacggcatctatcccaacggcaacgaggcgctggag
gcgatgatgacgatgtgggaagccgtcggcttcaacatcgacctgaccatgctcgacgtg
gcggactggacccggtacctgcagaaacccttctcgcaggaccgcggaccgaccctgctg
caggtcatgcacgacaacaacaagggcgacgccgccttcacgatcccgatcttctaccat
tcgtcgggacagtacgcgaccttctccgacccgaagctggacgcccggatcgacgaggcg
ctcgaccagaccgacgaggcccggaccaaggcgttccaggagatcctggcggaagtgcat
gacgggatcgcggtggacatcccgatgttccacatgatcggctacacccgggtcgggccc
ggcctcgactggcgcccgaacctgacgaccaacagcgagatccccctcgcggaaatccgc
ctgaagaagtga
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