Skermanella rosea: JL101_033105
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Entry
JL101_033105 CDS
T07666
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
sroe
Skermanella rosea
Pathway
sroe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL101_033105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_033105
Transporters [BR:
sroe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL101_033105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
Sigma54_activat
DUF87
ATP-synt_ab
nSTAND1
SbcC_Walker_B
nSTAND3
Sigma54_activ_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UEM07323
LinkDB
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Position
pSR-2:360494..362185
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AA seq
563 aa
AA seq
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MTGGTIPKKPILEVRGLTVDFLSDRDPFRAVSSVDFHVCPGETLCILGESGSGKSVSTSA
IMGLIDTPPGDIVAGRMVFDGRDLSAMTGEERRDLNGRRIAMIFQDPLAHLNPVYTIGWQ
IAEVFEAHGIARGGEARRRAVDLLRRVGIPDPEHRVDQYPHQFSGGQRQRVMIAMAIALQ
PSVIIADEPTTALDVSVQAQILDLLRDLQAEYGMALVLITHDLEVAASMADRVMVMKGGR
IVEEGEARTVFTRPKHDYTRALLSALPHADDADSHRRSGTAAGEPILRVENIVKRYTLGA
GLFGPAKFVDAVNDVSFVVGKGETVGIVGESGSGKSSVARILLRLNEPTSGRALYKGEDI
FGMDRRALLKLRRKVQMVFQDPYGSMNPRMDVRTIISEPLRIHRDILPKARWNDRVVELL
ELVGLKAEHAARHIHQFSGGQRQRIAIARALASDPELIVCDEAVSALDVSIQAQVIDLLA
DLRTRLGLSYIFITHDLPIVRHFADRIIVMKHGEIVEQGATQALFSNPQHPYTRTLLNAT
PHPKWETGAAVGAAALPDRQALP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaggaaccatcccgaagaaacccatcctggaggtgcgggggctgacggtcgac
ttcctgtccgaccgcgacccgttccgcgccgtcagctcggtcgatttccacgtctgcccc
ggggaaacgctctgcatcctgggggagagcggctcgggcaagagcgtcagcaccagcgcc
atcatggggctgatcgacacgccgccgggcgacatcgtcgccggccgtatggtgttcgac
ggccgcgacctgtcggccatgacgggggaggagcggcgcgacctgaacggtcgccggatc
gccatgatcttccaggatccgctggcgcacctcaacccggtctacacgatcggctggcag
atcgcggaggtgttcgaggcccacggcatcgcccggggaggcgaggcgaggcggcgggcg
gtcgacctgctgcgccgggtcgggatccccgatccggaacaccgggtcgaccagtatccc
caccagttctcgggcggccagcgccagcgcgtgatgatcgccatggccatagcgctccag
ccctccgtgatcatcgccgacgagccgacgaccgcgctggacgtcagcgtccaggcgcag
atcctggacctgctgcgcgacctccaggccgagtacggcatggcgctcgtcctgatcacc
cacgacctggaggtggcggcctccatggccgaccgggtcatggtgatgaagggcggccgg
atcgtcgaggagggcgaggccaggacggtcttcacccggccgaagcacgactatacccgc
gcgctgctgtcggccctgccgcacgccgacgacgctgactcccaccggcgttccggcacg
gccgccggcgagccgatcctgcgggtcgagaacatcgtcaagcgctacaccctgggcgcc
ggcctgttcggccccgccaaattcgtcgatgccgtcaacgacgtcagcttcgtggtcggc
aagggcgagacggtcggcatcgtcggcgagtccgggtccggcaagtccagcgtcgcgcgc
atcctgctgcgcctcaacgagccgacctcgggccgggcgctctacaagggggaggacatc
ttcggcatggaccggcgcgcgctgctcaagctgcggcggaaggtgcagatggtgttccag
gatccctacgggtccatgaaccccaggatggacgtacgcacgatcatctcggaaccgctc
cggatccaccgcgatatcctgcccaaggcccggtggaacgaccgggtggtcgaactcctg
gagttggtcgggctgaaggcggagcacgccgcccgacacatccaccagttctcgggcggg
cagcgccagcggatagcgatcgcccgggcgctcgccagcgaccccgagctgatcgtctgc
gacgaggcggtgtcggccctggacgtctcgatccaggctcaggtgatcgacctgctcgcc
gacctgcggacccgcttaggcctgtcctacatcttcatcacccacgacctgccgatcgtc
cggcatttcgccgaccgcatcatcgtcatgaagcacggcgagatcgtcgagcagggcgcc
acgcaggcgctgttctccaacccgcaacatccctacacgcgcacgctgctgaacgcgacg
ccccatcccaagtgggagaccggcgccgcggtcggcgctgccgcgcttcctgacaggcag
gcacttccatga
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