Skermanella rosea: JL101_033330
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Entry
JL101_033330 CDS
T07666
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K21136
membrane fusion protein, multidrug efflux system
Organism
sroe
Skermanella rosea
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_033330
Transporters [BR:
sroe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL101_033330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
HH_EMRA
BSH_CzcB
RND-MFP_C
YknX_C
BSH_Fcp1
HH_CzcB
BSH_CusB
HH_YBHG
Phage_scaffold
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
UEM07364
LinkDB
All DBs
Position
pSR-2:complement(429068..430126)
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AA seq
352 aa
AA seq
DB search
MLVVASLTLLAACGGDEESEAEPIRPVRVVTVEKREAGETVTLTGQIQAQEEVSLSFRVG
GRMIERPVNVGDRVEAGQVIARLDPEPARNALQTARANLTAAMGQLTRVRNDYDRQETLL
GQGWTTRARYDQALEARKSAEAQLDAAQAQLNIAEDQLEYTELVADSAGSVTARGAEPGE
VVAAGRMIVQLARQGGRDAVFDVPARVIQNAPADPVISVALTSDPTVSTTGRVREVAPQA
DPVTRTFQIRIGLHDPPEAMRLGSTVVGSMQLGGAGAIEIPASALTQSNRQPAVWIVDPA
SGTVALRNIDVDRFDLARVVVAQGLEPYDVVVTAGVQALRPGQQVRILGASP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtggtcgcgtcgctgacgctgctggcggcgtgcgggggtgacgaggaaagcgag
gccgagccgatccgtcccgtgcgggtggtgacggtcgagaagcgcgaggcgggcgagacg
gtgaccctgacggggcagatccaggcgcaggaggaggtcagcctgtcgttccgcgtcggc
gggcggatgatcgagcgcccggtgaacgtgggcgaccgcgtggaggccggccaggtcatc
gcccggctcgatcccgaaccggcgcgcaacgccctccagacggcccgcgcgaacctgacg
gccgccatgggccagttgaccagggtgcgcaacgattacgaccggcaggagaccctgctg
ggccagggctggaccacccgcgcgcgctacgaccaggcgctggaagcgaggaagtccgcc
gaggcgcagctcgatgcggcccaggcgcagctcaacatcgccgaggaccagctggaatat
accgaactggtggcggacagcgccggatccgtcaccgcccgcggcgccgaaccgggcgag
gtcgtggcggccggccgcatgatcgtgcaactggcgcgccagggcgggcgcgacgccgtc
ttcgacgtgccggcgcgagtgatccagaatgcgcccgccgaccccgtcatttcggtggcg
ctgacctcggacccgacggtgagcaccaccggccgggtgcgcgaggtggcgccgcaggcc
gatcccgtgacccgcaccttccagatccggatcggcctgcacgacccgcccgaggcgatg
cggctcggctccaccgtcgtcgggtcgatgcagttgggcggggccggcgcgatcgagatt
cccgcctccgccctgacgcagtccaaccgccagcccgccgtctggatcgtcgatccggcg
agcggcaccgtggcgctccgcaatatcgacgtcgaccgcttcgacctcgcgcgggtcgtc
gtcgcgcaagggctggaaccttatgacgtcgtggtcacggcgggcgtgcaggcgctgcgg
ccgggacagcaggtccgcatcctgggtgcatcaccgtga
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