Skermanella rosea: JL101_036365
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Entry
JL101_036365 CDS
T07666
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
sroe
Skermanella rosea
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UEM08218
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Position
pSR-7:complement(1015..2769)
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AA seq
584 aa
AA seq
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MSAALKLAIAAGSLLLGVAGGVSLLSTGCGVDALDFARAPELVRACVQASPRSGYYGFIA
VAAGLVGALATIAGTGGRKKQPRWERPVWSDRKAARRAGLLIGKDDDVSRVRIVGKIAPE
RLGQSWKFLSYCGDAHTLISGANRSGKGRGILVPTLLSYAQSVMVIDPKGEFLWGDKKLG
FPGTSGWRATFSKVVYFCPTDRRSARFNFLKACRPGEFQVRDVQNLVLAIINAVKPTFFD
RTAQEYVVAVALHLLNHPGADDVSIAGIRKFLALGDEGAAEIMTSEAHPVAARIASSLFP
AGLGGAEGDKMAAQRSDTYRTAGSYLWLWDDEVVAEVTSGECDFLPGDLMCLDQPMSLYV
RQPPSDAGRVAKLVHLLISQVLRDLTETLETDSRGRQKKHRLMILADEFHGLGHMPDFEE
KLPQIPGFGIECVLAVQTLAQIDQVYGEKNSIIDNCHVYVTFAANDNRTLKRISEMIGMA
PEIRDTESRTSSRGGASTTSGESRSWQYVMDPGAIRTLPENEEIVLRLGFLPWRARKVRY
DKERAFRDRLLPAVIEPPQLAYAPRVAPVEDQPLVPPAGFWKTT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagccttgaaactggcgatcgccgccggatctctgttgctcggcgtggcgggc
ggcgtctcccttctgtccaccggatgcggcgtggacgctctcgacttcgcccgagcgccc
gagctggtgcgcgcctgcgtccaggcgtcgccgcgctccgggtattatggcttcatcgcg
gtcgcggccggtctggtcggcgctctcgcgacgatcgccggcaccggtgggcgcaagaag
cagccccgatgggaacggccggtctggtcggatcgcaaggcggcgcgtcgggccggcctg
ctgatcggcaaggatgacgacgtgtcgcgggttcgcatcgtcggcaagatcgcgccggaa
cgtctgggccagtcgtggaaattcctgtcctactgcggcgacgcgcacaccctgatttcg
ggcgcgaaccggagcggaaaaggccgcggcatcctcgttccgacgctgctctcgtatgcg
caaagcgtgatggtgatcgatcccaaaggggaattcctgtggggcgacaagaagctcggc
tttccaggcaccagcggctggcgggcgactttctcgaaggtggtctatttctgcccgact
gatcgacgctccgcgcgcttcaacttcctgaaggcgtgccgccccggggagttccaggtc
cgcgacgtccagaacctggtgctggcgatcatcaacgcggtcaagccgacgttcttcgat
cggaccgcccaggagtatgtcgtcgcggtggcgctgcacctgctgaaccatcccggcgcc
gatgacgtctcgatcgctggcattcgcaagttcctggcgctcggcgacgagggcgcggcc
gagatcatgacgtcggaagcccatccggtcgcggcgcggatcgccagctcgctctttcct
gccggcctgggcggcgccgagggcgacaagatggcggcgcagcggtcggacacctatcgc
acggcgggctcttacctgtggctgtgggatgacgaggttgtggcggaagtcactagcggc
gagtgcgatttcttgccgggcgaccttatgtgtctcgaccagccgatgtcgctctatgtg
cgtcagccgccgtccgatgccggccgcgtcgccaagctggtgcacctgctgatctcccag
gttctgcgcgatctcaccgagacgctggagacggacagccgggggcggcagaagaaacac
cgcctgatgatcctggccgacgagttccacggcctgggccatatgcccgacttcgaggaa
aagctgccgcagatccccggtttcgggatcgagtgtgtgctggccgtccagacgctggcg
cagatcgatcaggtctatggggagaagaacagcatcatcgataactgccacgtctatgtg
acgttcgcggcgaacgataaccggaccttgaagcgcatttccgagatgatcggcatggcg
cccgagatccgcgataccgagagccggacgagcagccggggcggcgccagcacgacgagc
ggcgaaagccggtcctggcagtatgtcatggaccccggcgcgatccgaaccctgcccgaa
aacgaggagatcgtgttgcgcctgggcttcctgccctggcgggcgcgcaaggtgcggtac
gacaaggaacgcgccttccgggaccgtctgctgccggccgtcatcgagccgccccagctc
gcctacgcgccgagggtcgcgccggtcgaggatcagcctctcgttcccccggccggcttc
tggaaaaccacgtga
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