Streptomyces roseirectus: IAG44_10480
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Entry
IAG44_10480 CDS
T07860
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sroi
Streptomyces roseirectus
Pathway
sroi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAG44_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sroi03019
]
IAG44_10480
Messenger RNA biogenesis [BR:
sroi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IAG44_10480
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QNP69829
UniProt:
A0A7H0IAL3
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Position
complement(2580014..2581699)
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AA seq
561 aa
AA seq
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MSHPHPELGRPPVLPEGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGNRERIGPFDCEFIAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLADSTNAEVPGFVPPERDISNVLRQVFAGARKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPD
HEVVLVCTGSQGEPMAALSRMANRDHQIRIVDGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICRPKNLMPVHGEWRHLRANAELGAMTGVPHD
RIVIAEDGVAVDLIEGKAKISGKVQAGYVYVDGLSVGGVGEPALKDRKILGDEGIISVFV
VVDASTGKITAGPHVQARGSGIEDAAFDAVLPKITEVLERSAQDGVVEPHQLQQLIRRTL
GKWVSDTYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccgcatcccgaactgggccgtcccccggtgctccccgaaggcggcctgcgc
gtcacgccgctcggcggcctcggcgagatcggccgcaacatgacggtcttcgagtacggc
ggccgtctcctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctcatcctgccggacttctcgtccatcagggaccgcctcgacgacatcgagggcatc
gtcctgacccatggccacgaggaccacatcggcggcgtccccttcctcctgcgcgagaag
ccggacatcccgctgatcggctccaagctgaccctcgccctcatcgaggccaagctccag
gaacaccgcatccgcccgtacaccctcgaagtcgccgaggggaaccgcgagcgcatcggc
cccttcgactgcgagttcatcgccgtcaaccactccatcccggacgcgctggccgtggcc
atccgcaccccggcgggcatggtcgtccacaccggcgacttcaagatggaccagctcccg
ctggacggccgcctcaccgacctgcacgccttcgcgcggctcagcgaggaaggcatcgac
ctcctcctcgccgactccacgaacgccgaggtcccgggcttcgtcccgcccgagcgggac
atctccaacgtcctgcggcaggtcttcgccggcgcccgcaagcggatcatcgtggccagc
ttcgccagccacgtccaccgcatccagcagatcctggacgccgcccacgagtacggccgc
cgggtcgccttcgtcggccgctccatggtccgcaacatgggcatcgcccgcgacctcggc
tacctcaaggtccccccgggcctggtcgtcgacgtcaagaccctcgacgacctgcccgac
cacgaggtcgtcctggtctgcacgggctcccagggcgaaccgatggccgccctctcccgg
atggccaaccgcgaccaccagatccggatcgtcgacggcgacaccgtgatcctggcgtcg
tccctcatccccggcaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgccgcccgaagaacctgatgccggtccacggc
gaatggcgccacctgcgcgccaacgccgaactgggcgccatgaccggcgtcccccacgac
cgcatcgtcatcgccgaggacggcgtcgccgtcgacctcatcgagggcaaggccaagatc
tccggcaaggtccaggcgggttacgtctacgtcgacggcctctccgtcggcggagtcggc
gagccggcgctgaaggaccggaagatcctcggcgacgagggcatcatctcggtcttcgtg
gtcgtcgacgcctccaccggcaagatcaccgcgggcccgcacgtccaggcccgcggctcc
ggcatcgaggacgccgccttcgacgcggtcctcccgaagatcaccgaggtcctggagcgc
tccgcccaggacggcgtggtcgaaccccaccagctccagcagctcatccgccggacgctg
ggcaagtgggtctccgacacgtaccggcgcaggccgatgatcctgccggtggtcgtcgag
gtctga
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