Streptomyces roseirectus: IAG44_16105
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Entry
IAG44_16105 CDS
T07860
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sroi
Streptomyces roseirectus
Pathway
sroi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAG44_16105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sroi03021
]
IAG44_16105
03400 DNA repair and recombination proteins [BR:
sroi03400
]
IAG44_16105
Enzymes [BR:
sroi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAG44_16105
Transcription machinery [BR:
sroi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAG44_16105
DNA repair and recombination proteins [BR:
sroi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAG44_16105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Orbi_VP1
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QNP70809
UniProt:
A0A7H0IDE3
LinkDB
All DBs
Position
complement(3919218..3923117)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLEGD
LAELEAEGAKSDVRRKVREGAEREMKQLRDRTQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
DRSFSSVPEAIMAFDAGELALQSPVDIRFPVGTIPPRGWTPPVREEDEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKEIVAGYEAKDEKVQKQYERGLITKEERTQELIQIWTQATNEV
AEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLAIAERG
EDGVLRKTENVETSVYARMLAEDITVDGRVLAPANTDLGDVLIDELVRHGIEEVKTRSIL
TCESHVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAQGRVRIEETEKTKKIVITPDDGSDETAFPISKRARL
LVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagcttcggatcggcctggccaccgcggacgacatc
cgccagtggagccacggcgaggtcaagaagcccgagacgatcaactaccgcaccctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgttcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gacgagcgccgtacccgtgacctgccctccctggaggcgcacgtctcggtcgagcgccag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctggaaggcgac
ctggccgagctggaggcggagggcgccaagtccgacgtccgccgcaaggtccgcgaaggc
gccgagcgcgagatgaagcagctgcgcgaccgtacgcagcgcgagatcgaccgcctcgac
gaggtctggacccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctg
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggcgccgccgcg
ctgcagaagcgcctggagtccttcgacctcgacgaagaggccgagaagcttcgcgagatc
atccgcaccggcaagggccagaagaagacccgcgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagacgtccaacagccccaagggcatggtcctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgtctgaagcggctcctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggaggctgttgacgcc
ctcttcgacaacggtcgtcgtggccgtccggtcaccggtcccggtaaccgcccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgtttccgtcagaacctgctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtggagcgcggccgc
accgtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagctgcgcgacaccaagggcgag
gaccgctccttctcctcggtgcccgaggcgatcatggcgttcgacgccggggagctggcc
ctccagtcgccggtcgacatccgcttcccggtgggcaccatcccgccgcgtggctggacg
ccgccggtgcgcgaggaggacgagccggagtggcagcagggtgacagcttccggctgcgc
accacgctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtgatcgtcgccgcgacgctggacaacctgaaggcggccggcttccactgggcgacc
cgttccggtgtcaccgtcgccatctccgacgtcgtcgtccccgaggcgaagaaggagatc
gtcgccgggtacgaggccaaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatccagatctggacgcaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcgtccttccgtgagggcctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctcgccgacaccgccctg
cgtaccgccgactcgggttacctcacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgcggcaccgaccgcggcctcaagctggcgatcgccgagcgcggc
gaggacggcgtgctgcgcaagacggagaacgtcgagacgtccgtctacgcccgcatgctc
gccgaggacatcacggtcgacggccgtgtgctggccccggccaacaccgacctcggtgac
gtcctcatcgacgagctggtccggcacggcatcgaggaggtcaagacccgctcgatcctg
acctgtgagtcgcacgtcggcacctgtgccatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcgcagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcgcgtaccccgaagggtgtcgccccg
atctccgaggcccagggccgcgtacggatcgaggagaccgagaagaccaagaagatcgtc
atcacgccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcgcgtctg
ctggtcagtgagggtgagcacgtcgaggtgggccagaagctcacggtcggtgcgaccaac
ccccacgacgtgctgcgcatcctcggtcagcgcgcggtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgggtgacgatcatcgagtccggcgacgcggaactcctgccg
ggtgagctggtcgagcggtcgaagttcgagaccgagaaccggcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcctcgctggcgacc
gagtcctggctgtcggcggcgtccttccaggagacgacgcgagtcctcaccgacgcggcg
atcaacgccaagtccgactcgctcatcgggctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacggggctgtcccgttaccgcaacatccgggtggagccgaccgaggag
gccaaggccgcgatgtactcggcggtcggctacgacgacatcgactactcgcccttcggg
acggggtcgggtcaggcggttccgctggaggactacgactacgggccgtacaaccagtag
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