Streptomyces roseirectus: IAG44_23030
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Entry
IAG44_23030 CDS
T07860
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sroi
Streptomyces roseirectus
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sroi03016
]
IAG44_23030 (thpR)
Enzymes [BR:
sroi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IAG44_23030 (thpR)
Transfer RNA biogenesis [BR:
sroi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IAG44_23030 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF6093
Motif
Other DBs
NCBI-ProteinID:
QNP72003
UniProt:
A0A7H0IGT7
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All DBs
Position
5412382..5412954
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AA seq
190 aa
AA seq
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MRLFAAVLPPDDVTAELASVVDELRALPGAEALRWTERAGWHLTLAFYGDVDEDTVPELS
ARLERAARRSTPFGLAVRGGGQFGHGRVVWAGVAGEVAELRLLAQRAEAAGRRAGVEMGE
HRRYKAHLTLARGRDAVDTGPYADVLDRFAGRTWRVGELALVRSHLPVSGVTGERPRYEV
AGRWALGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgctgcctccggacgacgtcaccgccgaactcgcctccgtg
gtggacgagttgcgcgcgctgccgggtgctgaggcgctgcggtggaccgagcgggcgggg
tggcacctcactctcgcgttctacggggacgtcgacgaggacaccgttcccgagctgtcg
gcccggctggagcgcgcggcccggcgcagcacgccgttcggactcgccgtgcgcgggggc
gggcagttcgggcacgggcgggtggtgtgggccggggtggcgggcgaggtggccgagctg
cggctgctcgcgcagcgggcggaggcggcggggcgcagggccggggtggagatgggggag
caccggcggtacaaggcccatctgacgctggcgcgcgggcgcgacgcggtggacacgggg
ccgtacgccgacgtcctcgaccggttcgccgggcggacgtggcgggtgggggagctggcg
ttggtgcgcagccacctgccggtgtccggggtgacgggggagcggccccgctatgaggtg
gccgggcggtgggcgctcggcggggccggttag
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