Streptomyces roseirectus: IAG44_30240
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Entry
IAG44_30240 CDS
T07860
Name
(GenBank) DEAD/DEAH box helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
sroi
Streptomyces roseirectus
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sroi03019
]
IAG44_30240
Enzymes [BR:
sroi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IAG44_30240
Messenger RNA biogenesis [BR:
sroi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IAG44_30240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_25
HA2_N
Helicase_RecD
nSTAND3
NTPase_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QNP73303
UniProt:
A0A7H0IKI7
LinkDB
All DBs
Position
complement(7046116..7048830)
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AA seq
904 aa
AA seq
DB search
MIRYDALDALPVRDALPALADALEGHGTAVLVAPPGTGKTTLVPLALAGLVGGAPARRVV
VAEPRRIAARAAARRMAWLLGEEAGQSVGYTVRGERVVGRHTRVEVVTTGVLLQRLQRDQ
ELGGVDVVVLDECHERHLDADTAAAFLWDVREALRPELRLVAASATTDAQGWAGLLGGAP
VVEARGASYPVETVWAPPARAVRPPHGMRVDPALLAHVASVVRRALAERAGDVLCFLPGV
GEIARVAGQLGGLGDVDVLQVHGRAPAAVQDAVLAPGARRRVVLATAVAESSLTVPGVRV
VVDSGLAREPRVDHARGLSALATVRASQASGRQRAGRAGREAPGVVYRCWAEAEDGRLPR
FPAPEIKVADLAAFALQAACWGDPDASSLALLDPPPAGAMAAARDLLTAIGAIDPTGRAT
ARGARLARLGLHPRLGRALLDGSAEVGPERAAEVVALLSEEAPREYGDDLAAALRSARRG
GDAYSARWRAEVRRLRGVAGETGGRVSGAQGAAGTGGGPGTESGPGAEGGARAGGGAGSK
GVAGETAGPASGARGVAGAKGGPGAEGRSVQGPSRHAREGGDEHAVGLVVALAFPERVAR
LDGGSYLMVSGTRAEVREGSALRLAPWLAVAVADRPVGRGHARVQGAVVVDEGVARRAAG
ALLDAREEVLWAGGDVVARWVERLGAVELGVRVIRDADAGAVREALLDGLRQEGLGALRW
TEPAVGLRQRLAFVRAHVGEPWPDVSDAALYARVDEWLEPELGRARRRADLARIDAGAAL
GRLLPWASGEAGRLDELAPERITVPSGSRVRVDYGDPARPVLSVKLQEMFGLQESPRLAG
VPVVVQLLSPAGRPAAVTADLASFWREGYRGVRAELRGRYPKHPWPEDPATAEPTRHTNA
RLRR
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttacgacgctctcgacgcccttccggtccgtgacgcgctgcccgcgctggcc
gacgccctggaggggcacgggacggccgtgctcgtggcgccgcccgggacgggcaagacg
acgctggtgccgctggcgctggccgggctggtcggcggggcgcccgcgcgcagggtcgtc
gtcgccgagccccggcggatcgccgctcgggccgccgcgcggcggatggcgtggctgctg
ggcgaggaggccgggcagagcgtcgggtacaccgtgcgcggggagcgggtcgtcgggcgg
cacacacgcgtggaggtcgtgacgaccggtgtgctgctgcaacgcctccagcgggaccag
gagttgggcggggtcgacgtcgtcgtcctggacgagtgccacgagcggcatctggacgcc
gacaccgccgccgcgttcctgtgggacgtgcgggaggcgctgcggccggagctgcggctg
gtggcggcgtcagcgacgaccgacgcgcaggggtgggcgggcctgctcggcggggcgccc
gtggtcgaggcgcggggggcgtcgtacccggtcgagaccgtgtgggcgccgcctgcgcgc
gcggtgcggccaccgcacgggatgcgtgtcgatccggcgctgctcgcgcacgtggcgtcg
gtggtgcggcgggcgctcgccgagcgggcgggggacgtgctgtgcttcctgcccggggtg
ggcgagatcgcgcgggtcgccgggcagttgggcgggctcggggacgtcgacgtgctccag
gtgcacgggcgggcgccggccgccgtgcaggacgcggtgctcgctcccggggcgcggcgc
cgggtggtgctggcgacggccgtcgcggagtcgtcgctgacggttcccggggtgcgggtg
gtcgtcgactcggggctggcgcgcgagccgcgcgtcgatcacgcgcgcgggttgagcgcg
ctggcgacggtgcgggcctcgcaggcgtcggggcggcagcgggccgggcgtgcggggcgt
gaggcgccgggggtggtctaccgctgctgggccgaggccgaggacggccgtctgccgcgt
tttcccgccccggagatcaaggtggccgacctcgccgcgttcgccctccaggcggcctgc
tggggcgatcctgacgcctcctcgctggccctgctcgacccgcccccggccggcgcgatg
gccgcggcccgtgacctcctgacggcgatcggcgcgatcgaccccaccggccgggccacc
gcgcggggcgcccgcctggcccggctgggcctgcacccccgcctgggccgcgccctgctg
gacggctcggcggaggtgggtcccgagcgggcggccgaggtcgtggccctgctgagcgag
gaggccccgcgcgagtacggcgacgacctggccgccgcgctgcgcagcgcccggcgcggg
ggcgacgcgtacagcgcgcgctggcgggcggaggtgcgccggctgcggggagtcgccggg
gagacgggcggacgggtgtccggcgcccagggtgcggcggggaccgggggcgggccgggg
accgagagcgggccgggggccgaaggcggggcgagggccggaggcggggcgggaagcaag
ggcgtcgccggggaaacggccggaccagcgtccggcgcccggggcgtggcgggggccaag
ggcgggccgggggctgagggcaggtccgtccaggggccgtcccggcacgcgcgcgagggt
ggggacgagcatgccgtcgggctggtcgtcgcgctcgccttccccgagcgggtggccagg
ctggacggggggtcgtatctcatggtgtccggtacgcgtgcggaggtgcgggagggttcc
gcgctgcggttggcgccgtggctggcggtcgcggtggcggaccggccggtgggcaggggg
cacgcacgggtgcagggggcggtggtggtggacgagggggtcgcccggcgggccgccggg
gcgctgctggacgcgcgcgaggaggtgctgtgggccggtggggacgtcgtggcgcggtgg
gtggagcggctgggggcggtcgagctgggggtgcgggtgatccgggacgcggacgccggc
gcggtgcgggaggcgctgctcgacgggttgcggcaggaagggctcggggcgctgcggtgg
acggagccggccgtggggctgcggcagcggctggcgttcgtgcgcgcgcacgtcggggag
ccgtggccggacgtctccgacgcggcgctgtacgcgcgcgtggacgagtggctggagccg
gagctggggcgggcgcggcggcgggccgatctcgcgcggatcgacgcgggggcggcgctc
gggcggctgctgccgtgggcgtccggggaggcggggcggctggacgagctggcgccggag
cggatcaccgtcccgagcggttcccgggtccgggtcgactacggggatcccgcgcggccg
gtgctgtcggtgaagctccaggagatgttcgggcttcaggagtcgccccggctcgcgggc
gtgccggtggtggtgcagctgctgtcgcccgcggggcggccggccgccgtgacggcggat
cttgcgtcgttctggcgcgagggctaccggggcgtgcgcgcggagctgcgcgggcggtac
ccgaagcacccgtggcccgaggacccggcgacggccgagccgacgcggcacacgaacgcg
cgcctcaggcggtga
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