Streptomyces roseirectus: IAG44_30995
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Entry
IAG44_30995 CDS
T07860
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sroi
Streptomyces roseirectus
Pathway
sroi00040
Pentose and glucuronate interconversions
sroi01100
Metabolic pathways
sroi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IAG44_30995
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAG44_30995
Enzymes [BR:
sroi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IAG44_30995
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QNP73440
UniProt:
A0A7H0IKX4
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Position
7218741..7220066
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AA seq
441 aa
AA seq
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MHARKWHDHDRVMRYGTILGCTALVLSLTGVAAEAQPHRTTDLARQVLGAGDGWGSEGAG
TTGGAAADAEHVYTVTTWAQFKAALAAGGSAPKIIKVKGMIDAVSEGCDAFVTGGYDLQQ
YLKDYDPAVYGNDKVAMGPQEDARVASAANQDSVIKANVPSNTTIVGVGKNSGILGGSLQ
IKGVSNVILRNLTIEAPLDCFPKWDPTDDNHTGNWNSEYDAVVVFGTDHVWIDHNTLTDG
RYPDSERPVYFGKVFQQHDGLTDIVRGSNHVTVSWNSFENHDKNMLIGNSDSTAALDAGK
LKVTMHHNRFDGILQRSPRVRFGQVDVYNNHYVVDEAQQSDYYLFGIGRDSRLYASDNAI
SLPPGASVGKALKKWSEAPLTAENNYVNGRLTDLIAVHNTEIPAETLQSGAGWTPALRTR
VDSPRLVPAIVARGAGVGRVC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcacggaaatggcatgatcatgacagagttatgcggtacgggacgatcctgggc
tgcaccgccctggtcctctcgctgaccggcgtcgccgccgaggcccagccccaccggacg
acggacctcgcccgccaggtgctcggcgccggtgacggctggggctcggaaggggccggc
acgaccggcggcgcggcggccgacgccgagcacgtctacaccgtcaccacctgggcccag
ttcaaggccgccctcgcggccggcgggagcgctcccaagatcatcaaggtgaaggggatg
atcgacgccgtctccgagggctgcgacgccttcgtgaccggcggctacgacctccagcag
tacctgaaggactacgacccggcggtctacggcaacgacaaggtcgccatgggcccgcag
gaggacgcccgcgtcgcctccgccgccaaccaggactcggtcatcaaggccaacgtcccg
agcaacaccacgatcgtcggcgtcggcaagaactccgggatcctgggcgggagtctgcag
atcaagggcgtctccaacgtcatcctgcgcaacctgaccatcgaggccccgctcgactgc
ttccccaagtgggacccgacggacgacaaccacaccggcaactggaactccgagtacgac
gcggtcgtcgtcttcggcaccgaccacgtgtggatcgaccacaacacgctcaccgacggc
cgctaccccgacagcgagcggcccgtctatttcggcaaggtcttccagcagcacgacggc
ctcaccgacatcgtgcgcggctccaaccacgtgaccgtgtcgtggaattcgttcgagaac
cacgacaagaacatgctgatcggcaacagcgacagcaccgccgcgctcgacgcgggcaag
ctcaaggtcacgatgcaccacaaccgcttcgacggcatcctccagcgctccccgcgcgtg
cggttcgggcaggtcgacgtctacaacaaccactacgtcgtcgatgaggcccagcagtcg
gactactacctcttcggcatcggccgcgactcccgcctgtacgcgagcgacaacgcgatc
tcgctgccgcccggcgccagtgtcggcaaggcgctcaagaagtggagcgaggcgccgctg
acggccgagaacaactacgtcaacggccggctcaccgacctcatcgccgtgcacaacacg
gagatccccgccgagacccttcagtccggcgcgggctggacgccggccctgcgcacccgg
gtcgactcgccccgcctggtcccggcgatcgtcgcccgcggcgccggcgtcggccgcgtc
tgctga
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