Spiribacter roseus: BBH56_00420
Help
Entry
BBH56_00420 CDS
T06143
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sros
Spiribacter roseus
Pathway
sros03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBH56_00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sros03400
]
BBH56_00420
Enzymes [BR:
sros01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BBH56_00420
DNA repair and recombination proteins [BR:
sros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBH56_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AUB77728
LinkDB
All DBs
Position
complement(80444..81214)
Genome browser
AA seq
256 aa
AA seq
DB search
MKIASWNVNSLNVRLPHVLDWLETAGPDILGLQETKLPDERFPVEAIREAGYEVAYSGQK
TYNGVAVLARAPLEAVSLDIPGFEDPQRRVLAATVDGVRFINLYVPNGKAVGDDKYQYKL
EWLAHLRGWLQDELSRHDQVAVVGDFNIAPADADVHDPEEWAGKILCSDAERDALSAITA
LGFSDSFRRFEQPADRFSWFDYRVNNFKRNRGLRIDLILTSPALTRRLTASAVDLDPRRW
ERPSDHAPVLAEFTPA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgcgtcctggaacgtcaattcgctcaacgtccgcctgccccatgtcctcgac
tggctcgagaccgccggccccgacattctggggctgcaggagaccaagctgcccgacgag
cgattcccggtggaggcgatacgcgaggccggctacgaggtggcctactcgggccagaaa
acctacaacggcgtggcggtgctcgcacgcgcgccgcttgaggcggtcagcctcgacatc
cccggtttcgaggacccgcagcgccgggtgctggccgccacggtcgatggcgtgcgcttc
atcaacctgtatgtgcccaacggcaaggcggtgggcgacgacaaataccagtacaagctg
gagtggctcgcgcatctgcgcggctggctgcaggacgagctgagccgccacgaccaggtg
gcggtggtgggcgatttcaatatcgcgccggcggatgccgatgtccacgatcccgaggag
tgggcggggaagatcctctgctccgatgccgagcgcgatgccctgtcggccatcaccgca
ctgggcttcagcgacagcttccgacgcttcgagcagccggctgaccgcttttcgtggttc
gactaccgggtcaacaacttcaagcgcaatcgcggtctgcgcatcgacctgatcctgacc
agccccgccctcacccggcgcctgaccgccagcgcggtggacctcgacccccggcgctgg
gaaaggccctcggaccatgcccctgtgctggcggagttcacgccggcgtga
DBGET
integrated database retrieval system
