Spiribacter roseus: BBH56_01570
Help
Entry
BBH56_01570 CDS
T06143
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
sros
Spiribacter roseus
Pathway
sros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBH56_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sros03019
]
BBH56_01570
Enzymes [BR:
sros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBH56_01570
Messenger RNA biogenesis [BR:
sros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBH56_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AUB77932
LinkDB
All DBs
Position
complement(314586..315863)
Genome browser
AA seq
425 aa
AA seq
DB search
MEQNHLSDTAFESLGLHESLHTGLREAGFEQCMPIQAAALPIALEGRDVAGQAQTGTGKS
AAFLLATMHWLMSRPVAADKKGPWAIILAPTRELALQIHKDAERLGWFTGMDFACIYGGT
GYESQRKALERGTDVLIGTPGRIIDFFKQGVFSLDNIEVCVLDEADRMFDMGFIADIRYL
LRRMPAPDQRLNMLFSATLSERVRELAYEHMNEPESVQIESDTITADRVRQTLYHVENNQ
KIGLLIGVLRQQAPTRTLLFVNTKRDADRVAAYLIGNDIKAAVISGDIPQNKREQLLEKF
QGGDLPILVATDVAARGLHIPEVSHVINYDLPQDAEDYVHRIGRTARAGAAGDAISFACE
TYVYSLPDIERYIDQKIPAEMAPAELIVDDLKPAARMNNRRSGNSRRSGGNRRQSGSSAG
GGDQS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaatcatctctctgacaccgctttcgagtccctcggacttcacgaatccctt
cacacaggcctgcgcgaggccggcttcgagcagtgcatgccgatccaggccgcggccctg
cccatcgccctcgagggccgcgacgtggccggccaggcccagaccggcaccggcaagtcg
gcggcctttctgctggccaccatgcactggctgatgtcgcgcccggtggccgccgacaag
aaaggcccctgggccatcatcctggcgcccacccgcgagctcgccctgcagattcacaag
gatgccgaacggctcggctggttcaccggcatggactttgcctgcatctacggcggcacc
ggctacgaaagccagcgcaaggccctggagcgcggcaccgacgtgctgatcggcacaccg
gggcggatcatcgactttttcaagcagggggtgttcagcctcgacaatatcgaggtctgc
gtgctcgacgaggccgaccgcatgttcgacatgggcttcatcgccgacatccgctatctg
ctgcggcgcatgccggcgccggaccagcgcctcaacatgctgttctcggcgacgctgtcc
gagcgcgtccgcgagcttgcctacgagcacatgaacgagcccgagtcggtgcagatcgag
tcggacacgatcaccgccgaccgcgtccgccagaccctctaccatgtcgagaacaaccag
aagatcggcctgctcatcggtgtactgcgccagcaggcgcccacgcgcaccctgctgttt
gtcaacaccaagcgcgacgccgaccgggtggccgcctatctgatcggcaacgacatcaag
gccgccgtcatctccggcgacatcccgcagaacaagcgcgagcagctgctggagaaattc
caggggggcgacctgccgatcctcgtcgccaccgatgtggccgcgcgcgggctgcatatc
cccgaggtcagtcacgtcatcaactacgacctgccccaggatgccgaggattatgtgcac
cgcatcgggcgtacggcccgggccggcgccgccggtgatgcgatcagcttcgcctgcgag
acctacgtctattcgctgcccgacatcgagcgctacatcgatcagaagatcccggcggaa
atggcgcccgccgagctgatcgtcgacgacctcaagcccgcggcgcgcatgaacaaccgc
cgcagtggcaacagccggcgcagcggcggcaaccgccgccagagcgggtcatccgcgggc
ggcggcgatcagtcgtag
DBGET
integrated database retrieval system
