Spiribacter roseus: BBH56_01885
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Entry
BBH56_01885 CDS
T06143
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
sros
Spiribacter roseus
Pathway
sros02024
Quorum sensing
sros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBH56_01885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBH56_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sros03019
]
BBH56_01885
03036 Chromosome and associated proteins [BR:
sros03036
]
BBH56_01885
Messenger RNA biogenesis [BR:
sros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BBH56_01885
Chromosome and associated proteins [BR:
sros03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BBH56_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AUB77986
UniProt:
A0ABV3S0P3
LinkDB
All DBs
Position
375684..375935
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AA seq
83 aa
AA seq
DB search
MSKGQSLQEPFLNALRKEKVPVSIYLVNGIKLQGQVDSFDQFVILLRNSISQLVYKHAIS
TIVPSRNVRELLQEERDPETDPE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggacaatcactgcaggaacccttcctcaacgcgcttcgcaaggaaaaggtc
ccggtgtcgatctatctggtcaatggcatcaagctccagggtcaggtggactcgttcgac
cagttcgtgatcctgcttcgcaactcgatcagtcagctggtctacaaacacgccatttcc
acgatcgtgccatcgcgcaacgtccgcgagcttctgcaggaggagcgagatcccgaaacc
gacccggagtga
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