Spiribacter roseus: BBH56_01980
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Entry
BBH56_01980 CDS
T06143
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sros03400
]
BBH56_01980
DNA repair and recombination proteins [BR:
sros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBH56_01980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
AAA_22
AAA_16
Lon_C
AAA
DnaB_C
DUF7125
MCM
AAA_24
AAA_5
ABC_tran
NACHT
SLFN-g3_helicase
RecA
Zn_ribbon_Nudix
NTPase_1
nSTAND3
DUF7129
GvpD_bR2
Motif
Other DBs
NCBI-ProteinID:
AUB78004
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All DBs
Position
392598..393989
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AA seq
463 aa
AA seq
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MAKGSTKTRYICTACAAVSPQWAGQCPECGEWNTLEEQRAPTPAAGTRGSIQGRAQYAGD
SGIRTLAEVPRDRETRFSAGVGEFDRVLGGGLVAGGVILLGGDPGIGKSTLLLEVVARVA
SRHGALYVTGEESLQQVGLRAERLGVGDAGLKLLAETRVETIIELAARERPEVLVVDSIQ
TIHSDALGSAPGGVAQVREAAAQLVQFAKQTGTVLFLVGHVTKEGQLAGPRVLEHMVDTV
LYFESDSGSRYRLLRAVKNRFGAANELGVFAMLETGLKEVKNPSAIFLSRHEQPVPGSAI
LVTREGTRPLLLELQALVAESPLSNPRRLAVGMDGNRMGMLLAVLQRHAGVSTAGEDVFV
NVVGGVRIAETASDLPALLAVISSLRDRPIPQDWVIFGEVGLAGEIRPVPNGPDRLAEAA
RHGFRRALVPAKNAPARGEAPEGLEVIGVERLDAALDWIREAD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggtagtaccaagacccgctacatctgcaccgcctgcgcggcggtatccccc
cagtgggccggccagtgcccggagtgcggtgagtggaacaccctcgaagagcagcgcgcg
ccgacgccggccgccggtacccgcggatccatccaggggcgggcgcagtatgcgggcgac
agtggcatccgcacactggccgaagtcccgcgcgatcgcgagacacggttttcggccggg
gtcggggagtttgatcgggtgctgggcggcggtctggtggccggcggcgtcatcctgctg
ggcggtgatccgggcattggcaagtcgacccttctgctcgaggtggtggcccgagttgcc
agccgccatggggcgctgtatgtcaccggcgaggagtcgctccagcaggtcggcctgcgc
gccgagcggctgggcgtgggggatgccgggctcaagctgctggccgagacccgggtcgag
accatcatcgagctggctgcccgcgagcgccccgaggtgctcgtcgtcgattccattcag
accattcacagcgatgccctaggctcggccccggggggcgttgcgcaggtgcgcgaggcg
gccgctcagctggtgcagtttgccaagcagaccgggacggtgctgttcctggtcggccat
gtcactaaggaaggccagctcgccggcccgcgggtgctggagcacatggtcgacacggtg
ctctacttcgagagcgactccggcagtcgctatcgactgctgcgcgcggtcaagaaccgc
ttcggcgcggccaacgagctgggggtgttcgccatgctcgagaccggcctcaaggaggtg
aaaaacccctccgcgatcttcctgtcacgccacgaacagccggtgcccggcagtgccatt
ctggtcacccgcgagggcacccggcccctgctgcttgaactccaggcactggtggcggaa
agcccgctgtccaatccgcggcggctggccgtgggcatggacggcaatcgcatgggcatg
ctgctggcggtgctgcagcgtcacgccggggtgagcaccgccggcgaggacgtcttcgtc
aatgtcgtcggcggggtgcgcatcgccgaaacggccagcgacctgccggcgctgctggcc
gtgatctcaagcctgcgtgatcgcccgatcccccaggactgggtgatatttggtgaggtg
ggtctggccggcgagatccggccggtcccgaacggcccggaccgtctcgcggaagcggcc
cggcacggtttccggcgcgccctggtgccggccaagaacgcgccggcgcggggcgaggca
cccgaggggcttgaggtcatcggcgttgagcggctcgatgccgccctcgactggatccgc
gaggcggattag
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