Spiribacter roseus: BBH56_03640
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Entry
BBH56_03640 CDS
T06143
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sros03400
]
BBH56_03640
Enzymes [BR:
sros01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BBH56_03640
DNA repair and recombination proteins [BR:
sros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BBH56_03640
Prokaryotic type
BBH56_03640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
AUB78283
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All DBs
Position
complement(734184..735428)
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AA seq
414 aa
AA seq
DB search
MFANAPEASHPAGLARLEAFIPHAGADYARGRNHDLGPEGDNAVSALSPWLRHRLLLEET
AIDAAIAAHGLDGAEKFIQEVCWRTYWKGYLERRPVHWHDYRAACDEAHGQVAKDRRLAA
DLQTALDGDTDIDAFNFWVDELRETGYLHNHARMWFASIWVFTLELPWALGADFFLRHLL
DGDPASNTLSWRWVAGLHTPGKPYIARSSNINKYTQGRFNPGYRINTQVEIPEGVERPPV
GPSPLAVDWQATPTTGLLITEDDLLPESLFGERDWPLVIAVQSTDWRSSGPVAARVRDFA
HAGLADALARNPGARAIGPIDLASADGLTAVREAATAAGVDRLLTPYVPTGPTADAMAAL
DPVLAADGITRQAVPRDWDVLHWPASTHGFFRFWKAARPLIMERAGAGSLSHGG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaacgcccctgaggccagtcacccggcgggactcgcccggctcgaggccttc
atcccccatgccggggccgactacgcccgcggccgcaaccatgacctggggcccgagggc
gacaatgcggtctccgcgctgtcaccatggctgcggcatcgcctgctgctcgaggagacg
gccatcgacgccgccatcgccgcccatggcctggatggcgcggagaagttcattcaggag
gtctgctggcgcacctactggaagggctacctggagcgccgcccggtgcactggcatgac
tatcgcgccgcctgcgacgaggcgcacgggcaggtggccaaggaccgtcggctggccgcc
gacctgcagacggcgctggatggcgacaccgacatcgacgcgttcaacttctgggtggac
gagctgcgcgagaccggttacctgcacaaccacgcccggatgtggttcgcgagcatctgg
gtattcaccctcgagctaccctgggcgctgggcgcggatttcttcctccgccacctgctc
gacggcgatcccgcctccaacacgctttcctggcgctgggtggccgggctgcacacgccg
ggcaagccctacatcgcgcgctcatcgaacatcaacaaatacacacagggccgcttcaac
cccggctatcgcatcaacacccaggtcgagatccccgagggcgtcgagcgcccgccggtg
gggccctcaccgctcgcggttgactggcaggccaccccgaccaccgggctgctgatcacc
gaggatgacctgctgccggagtcgctgttcggtgagcgggactggccactggtcatcgcc
gtgcagagtacggactggcgcagcagcgggccggtggcggcgcgggttcgggatttcgcc
catgccgggcttgccgatgccctggcccgcaatccgggcgcgcgggccatcggccccatc
gacctggcgagcgccgacgggctgacagcggtgcgcgaggccgccacggcggcgggcgtc
gatcggctgctgaccccctacgtacccaccggtccgactgctgacgcgatggccgccctg
gatccggtcctcgccgctgacggcatcacccgccaggctgtgccgcgggactgggacgtc
ctccattggccagcctcgacccacgggttcttccgtttctggaaggccgcacggccgctg
atcatggagcgggccggggccgggtctctgtcccacggggggtga
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