Spiribacter roseus: BBH56_03680
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Entry
BBH56_03680 CDS
T06143
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sros01011
]
BBH56_03680
Enzymes [BR:
sros01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BBH56_03680
Peptidoglycan biosynthesis and degradation proteins [BR:
sros01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BBH56_03680
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
PG_binding_2
Glucosaminidase
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
AUB78290
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Position
complement(741059..742270)
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AA seq
403 aa
AA seq
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MNRLIPGLLAIALLPAPAMGAIPPDDFAACLDGIRDTARARDIAPTTIDTLLDGLTPSER
VIELDRRQPEFTTTLHDYLNARVDRGRIQRGRRLLREHADLLARIEAEYGVPARYLVAFW
GLESNFGRTTGSMSTVRSLATLACDRRRGEFFESQLIFALQLVDDRTVSADQLRGSWAGA
LGNFQFLPSVYRDHAVDADGDGRIDLWDSLPDAAESAANFLRARGWEPEHRWGREVRLPE
GFDYRLAETEQSVADWARAGLRRANGGALPAADLEARLIVPAGAEGPAFLVYRNFDVIMR
WNPSRAYALSVGLLADRLVGAPPLANPPPDRPALPVDTIEAVQTALRTRGFDVGPVDGRM
GPQTRQAIRSFQGQQAMTRDGHPDRGLLRALGIEQSEDSDHVE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgactcattccggggctccttgccatcgccctgctgccggcgcctgccatgggc
gccatcccgccggacgatttcgccgcctgcctggatggcatccgcgatacggcgcgggcc
cgggatatcgcccctaccaccattgatacgctgctggacggactcacgcccagcgaacgg
gtcattgagctggaccgacgccagcccgaattcaccacgacgctgcatgactacctgaac
gcccgtgtcgatcgcggccgcattcagcgcggccggcgactgctgcgcgagcatgccgat
ctgctggcccgtatcgaggccgaatacggggtccccgcccgctatctggtggccttctgg
ggactggagagcaacttcggccgcaccaccggatcgatgtccaccgtgcgctcgctggcc
acactcgcctgcgaccgacgccgtggcgagttctttgaatcgcagctgattttcgccctg
cagctggtcgatgaccggaccgtcagcgctgatcagctgcgtggctcatgggccggcgcc
ctgggtaacttccagttcctgcccagtgtctatcgcgaccatgccgttgatgccgacggc
gacggacggatcgatctgtgggacagcctgccggatgccgccgagtccgccgccaacttc
ctgcgtgcccgcggctgggagcccgagcaccgctgggggcgggaagtccgcctgcccgag
ggattcgactaccggctggccgaaaccgagcagtcggtcgccgactgggcgcgggccggc
ctgcgccgggccaatggcggggcgctgccagcagccgatctcgaagcccggctgatcgta
ccggcgggggccgagggcccggcgttcctcgtctaccgcaatttcgacgtgatcatgcgc
tggaacccgtcgcgggcctacgccctgtcggtgggcctcctcgctgatcggctggtgggc
gcgccgccgctggccaacccgccaccggaccgcccggccctgccggttgacaccatcgag
gccgtgcagacagcgttgcggacacgcggctttgacgtggggcccgtggacggccgaatg
gggccacagacccgtcaggccatacgatcgtttcagggccagcaggccatgacccgcgac
ggtcatcccgaccgtggcctgctgcgcgcactcggcatagagcaatcggaggactcggac
catgtggaataa
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