Spiribacter roseus: BBH56_03810
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Entry
BBH56_03810 CDS
T06143
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
sros
Spiribacter roseus
Brite
KEGG Orthology (KO) [BR:
sros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sros03000
]
BBH56_03810
Transcription factors [BR:
sros03000
]
Prokaryotic type
Helix-turn-helix
Other families
BBH56_03810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS
PAS_8
PAS_4
Mg_chelatase
AAA_5
HTH_30
HTH_23
PAS_9
AAA
HTH_Tnp_ISL3
PAS_7
AAA_2
HTH_28
DUF6262
Sbi-IV
PAS_10
AAA_16
HTH_psq
DUF8493
nSTAND3
HTH_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AUB79387
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Position
769710..771569
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AA seq
619 aa
AA seq
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MGFSRLKEVFRVIVPSYAAQADVHIVDRGFDDALAEIRRYQQTRGVDAVVAAGSNGAFLR
RHLALPVILVTLTGFDVLNALATARRSARRIALISHGMTHPELIEFKQHFGLELEHYAYE
TAADAERRVSALAGRGVGAIIGPGLVTDLAEQAGLAGIFVYSRASVEQALDSAIEISRIG
RIEAARRERLDTILQQLEEGVVAVDMDERVQSLNPAMARLLGVDADAVEGRRLSQVASQL
ALHDTLAHGVTELGGVQRIGNRTVVTNRIPIREQGVQTGAVVTVQDSATIQRVDRSLRST
NKPRQFAARYELDGIIGDSQPLREARTLAAQYAATDTTVLILGESGTGKELLAQGIHNAS
ARRGHAFVALNCGAFPESLLESELFGFEEGAFTGSRRGGKPGLFESAHTGTIFLDEIGEM
PLTLQTRLLRVLQEHEVIRLGATQPTPVDVRVIAATHRDLAAAVAEGAFRQDLYYRINIL
RLDVPPLRERLDDLPALARSIAGRALARQGRTGAMPAMLEQVMPYCRAYHWPGNIRELEN
LIERVAIFAPGFESGPMDQQRLERLVPELFSDATPPRPAVDDIDAIHRVLAQCGGNRSAA
CRQLGISRSTLWRRLSGAS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgggcttcagccgcctcaaggaggtgtttcgggtgatcgtccctagttacgccgcgcag
gccgatgtgcatatcgtcgatcgcggttttgacgatgcgctggccgaaatccgccgctat
caacagacccgcggcgtggacgcggtggtggccgcgggctcgaacggggcgtttctgcga
cggcacctggccctgccggtgatcctggtgaccctcaccggctttgatgtgctcaacgca
ctggcgacggcgcgccgatcggcccgccgcatcgccttgataagccacggcatgactcac
cctgaactgattgaattcaaacagcatttcggccttgaactggagcactacgcctacgag
acggccgccgatgccgaacgccgggtcagtgccctggcgggccgcggagtgggggcgatc
atcgggccggggctcgtcaccgacctggccgaacaggcgggcctcgcgggcattttcgtt
tactcgcgcgcctccgtggagcaggcgctcgacagcgccattgagatcagccgtatcggg
cgaatcgaggcggcgcgccgtgagcgtctcgataccatcctccagcagctcgaggagggc
gtggtggcggtggacatggatgagcgggtgcagtcgctcaatcccgccatggcccggttg
ctgggggtggatgccgacgcggtcgaggggcggcggctgagccaggtggcgagccagctg
gccctgcatgacaccctggcgcacggggtgacggagctggggggcgtccagcgcattggc
aaccggaccgttgtcaccaaccgcatcccgatccgcgagcagggtgtgcagaccggggcg
gtggtcaccgtccaggactcagcgaccatccagcgggtggaccggagcctgcgctccacc
aacaagccccggcagttcgccgcccgctacgagctcgacgggatcatcggcgactcgcag
cccctgcgcgaggcgcgcacgctggcggcccagtatgccgccactgataccacggtgttg
atcctcggcgagagtggcaccggcaaggagctgctcgcccagggcatccacaacgccagt
gcccggcgggggcatgcatttgtcgccctcaactgcggggccttccccgagagccttctg
gagagcgaactgttcgggtttgaggagggcgctttcaccggctcgcggcgcggcggcaaa
cccgggctgtttgaatcggcccacaccggcacgatctttcttgacgagatcggggagatg
ccgcttacgctccagacccggctattgcgggtcctccaggaacatgaggtgatccgcctc
ggcgccacccagccgacaccggtggatgtgcgcgtcattgccgccacccatcgcgacctg
gcggccgcggtggcggagggggccttccggcaggatctctactaccgcatcaacatcctg
cggctcgacgtgccgccgctgcgcgagcggcttgatgatctgcccgcactggcgcgcagc
attgccggccgggcgcttgcccgccagggccggaccggtgccatgccggcgatgctcgag
caggtgatgccgtactgccgggcctatcactggccgggcaatatccgcgaactggaaaac
ctgatcgagcgcgtggcgatctttgccccgggatttgaatccgggcccatggatcagcag
cggctcgagcgcctggtcccggagcttttcagcgacgcgacgccgccccggcccgccgtt
gacgacatcgacgcgatccatcgggtgcttgcccaatgcggcggcaatcggagtgccgcc
tgccgtcagctggggatcagccgcagtacgctctggcggcgcctgtccggcgcgtcatga
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